RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 KIR2DL1P43626 348 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 KIR2DL2P43627 348 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 KCNJ4P48050 445 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SNRPNP63162 240 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 HTRA4P83105 476 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 CDC42EP1Q00587 391 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 GRIN1Q05586 938 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 CHRNDQ07001 517 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 DBPQ10586 325 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 PTK2BQ14289 1009 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SPARCL1Q14515 664 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 NOLC1Q14978 699 aaKnown RBP eCLIP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SEPT2Q15019 361 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 NOMO1Q15155 1222 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SUPT20HL1Q3ZLR7 823 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 KHDC1Q4VXA5 237 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 CCDC184Q52MB2 194 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 GJC2Q5T442 439 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 JMJD6Q6NYC1 403 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 GAREM2Q75VX8 874 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 BEND5Q7L4P6 421 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 UBE3BQ7Z3V4 1068 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 RHOT1Q8IXI2 618 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 OR8H2Q8N162 312 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 CERS5Q8N5B7 392 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SH2D3CQ8N5H7 860 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 TSPYL6Q8N831 410 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 PCYOX1LQ8NBM8 494 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SLC17A8Q8NDX2 589 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 LINS1Q8NG48 757 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.64□□□□□ -1.833e-12■■■■□ 22.2
CNOT1-221ENST00000569924 LINC01599Q8WXQ3 324 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 MUL1Q969V5 352 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 NMD3Q96D46 503 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 C18orf8Q96DM3 657 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SCARF2Q96GP6 870 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 CLPTM1LQ96KA5 538 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 NACC1Q96RE7 527 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 MPHOSPH8Q99549 860 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 G6PC3Q9BUM1 346 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 EIF2AQ9BY44 585 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 PRKRIP1Q9H875 184 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SERHLQ9NQF3 203 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 VPS45Q9NRW7 570 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 TM7SF3Q9NS93 570 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 GJB4Q9NTQ9 266 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 PIH1D1Q9NWS0 290 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 UCKL1Q9NWZ5 548 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 NOP53Q9NZM5 478 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 FTSJ1Q9UET6 329 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 ABCF2Q9UG63 623 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 AFF4Q9UHB7 1163 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 MKL2Q9ULH7 1088 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 NOL7Q9UMY1 257 aaKnown RBP3.64□□□□□ -1.83
CNOT1-221ENST00000569924 PLAGL2Q9UPG8 496 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 TMX2Q9Y320 296 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 TRIM17Q9Y577 477 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 SNX11Q9Y5W9 270 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 IL16Q14005 1332 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 FAM205AQ6ZU69 1335 aa3.64□□□□□ -1.83
CNOT1-221ENST00000569924 ANKRD18BA2A2Z9 1011 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 A6NLC8 198 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 FAM170BA6NMN3 283 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 IPO5O00410 1097 aaKnown RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SGSM2O43147 1006 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 ARHGAP6O43182 974 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 HOXC11O43248 304 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 NRP2O60462 931 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 USP2O75604 605 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MPIG6BO95866 241 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CEACAM5P06731 702 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SPATA31C1P0DKV0 1188 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 VDRP11473 427 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 FUT4P22083 530 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CNTFP26441 200 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 STAT5AP42229 794 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 NRG3P56975 720 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 RTP1P59025 263 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SP3Q02447 781 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CRHR2Q13324 411 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 TNFAIP1Q13829 316 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 EFR3AQ14156 821 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MYBPC2Q14324 1141 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 RAB39AQ14964 217 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 ARHGEF6Q15052 776 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 TWISTNBQ3B726 338 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 KHDC1LQ5JSQ8 128 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 GPATCH4Q5T3I0 446 aaKnown RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 AGAP9Q5VTM2 703 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 TSHZ3Q63HK5 1081 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CNKSR3Q6P9H4 555 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 DSTYKQ6XUX3 929 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SPOCD1Q6ZMY3 1216 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CATSPERGQ6ZRH7 1159 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 G2E3Q7L622 706 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 ZNF804AQ7Z570 1209 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MILR1Q7Z6M3 343 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 ANKRD23Q86SG2 305 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CABP7Q86V35 215 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms