RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LAPTM5Q13571 262 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ODF1Q14990 250 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 IGSF11Q5DX21 431 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 HECTD3Q5T447 861 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 FAM205BPQ63HN1 556 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 LRRC8DQ7L1W4 858 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 SLC41A1Q8IVJ1 513 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZNF579Q8NAF0 562 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZBTB8BQ8NAP8 495 aaPredicted RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 FAM174AQ8TBP5 190 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZNF606Q8WXB4 792 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 PDLIM2Q96JY6 352 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 CTAGE1Q96RT6 745 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TACO1Q9BSH4 297 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 THG1LQ9NWX6 298 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 SLC9A2Q9UBY0 812 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 PCDHA7Q9UN72 937 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 SCAF8Q9UPN6 1271 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 SLC8A2Q9UPR5 921 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TRPV2Q9Y5S1 764 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 SLC30A1Q9Y6M5 507 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TYW5A2RUC4 315 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 PITPNM1O00562 1244 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 MT-CO1P00395 513 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 PGK1P00558 417 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 SLFN14P0C7P3 912 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 HOXB8P17481 243 aaPredicted RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 MPSTP25325 297 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 CETN2P41208 172 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 LIFRP42702 1097 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TBX2Q13207 712 aaPredicted RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 NPY5RQ15761 445 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 METTL7BQ6UX53 244 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ESX1Q8N693 406 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 GPR161Q8N6U8 529 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 TEKT4Q8WW24 435 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 VPS50Q96JG6 964 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZNF577Q9BSK1 485 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZNF302Q9NR11 478 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TMEM260Q9NX78 707 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 GMEB2Q9UKD1 530 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 FGF19O95750 216 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SOX11P35716 441 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GJA9P57773 515 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 TROAPQ12815 778 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 NR5A1Q13285 461 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 STK38Q15208 465 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 LRIT3Q3SXY7 679 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 KRT40Q6A162 431 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 B4GALNT4Q76KP1 1039 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ZNF619Q8N2I2 560 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CCDC110Q8TBZ0 833 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ARNTL2Q8WYA1 636 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 NT5C3AQ9H0P0 336 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SLITRK6Q9H5Y7 841 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CAAP1Q9H8G2 361 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CDHR5Q9HBB8 845 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SLC38A10Q9HBR0 1119 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 WDR90Q96KV7 1748 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 TISP43B9A030 160 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 B9A039 149 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SEC24DO94855 1032 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 FAM13AO94988 1023 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 EOMESO95936 686 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ALOX15P16050 662 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 ALDH1A3P47895 512 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ATXN3P54252 364 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 PLTPP55058 493 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 UBE3AQ05086 875 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 DMWDQ09019 674 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 BMPR2Q13873 1038 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 TMEM132BQ14DG7 1078 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 TRIM60Q495X7 471 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 C10orf53Q8N6V4 93 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 C8orf76Q96K31 380 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CATSPER2Q96P56 530 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SSUH2Q9Y2M2 353 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GPR52Q9Y2T5 361 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SIPA1L1O43166 1804 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SYNJ2BP-COX16A0A087WUM0 186 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 A0A1B0GUA9 196 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 SLC12A8A0AV02 714 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GOLGA8JA6NMD2 632 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 A8MVJ9 347 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 BTBD18B2RXH4 712 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GOLGA8TH3BQL2 631 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GOLGA8MH3BSY2 632 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ZNF197O14709 1029 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 PHACTR2O75167 634 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 RTN2O75298 545 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GOLGA8HP0CJ92 632 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 PLCB3Q01970 1234 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 PTGDRQ13258 359 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ELOAQ14241 798 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 STXBP5Q5T5C0 1151 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CXCL17Q6UXB2 119 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 INTS8Q75QN2 995 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 LINC00301Q8NCQ3 95 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms