RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 APOL5Q9BWW9 433 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 SMYD3Q9H7B4 428 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 CISHQ9NSE2 258 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 FNIP2Q9P278 1114 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 DNAJC12Q9UKB3 198 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.33
USB1-215ENST00000569252 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 ADH1AP07327 375 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 KRT5P13647 590 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 ASPAP45381 313 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 RAP1GAPP47736 663 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 RAPGEF1Q13905 1077 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
USB1-215ENST00000569252 MAPRE1Q15691 268 aaKnown RBP17.09■□□□□ 0.33
USB1-215ENST00000569252 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
USB1-215ENST00000569252 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 ZNF397Q8NF99 534 aaPredicted RBP17.09■□□□□ 0.33
USB1-215ENST00000569252 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
USB1-215ENST00000569252 IQCDQ96DY2 449 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 TLE6Q9H808 572 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 DPP7Q9UHL4 492 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 CDH9Q9ULB4 789 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
USB1-215ENST00000569252 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
USB1-215ENST00000569252 TMEM221A6NGB7 291 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 M0R296 226 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 GABRDO14764 452 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 CPB1P15086 417 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 UCHL3P15374 230 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 ELF1P32519 619 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 OR1D2P34982 312 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 NDST1P52848 882 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
USB1-215ENST00000569252 POLR2FP61218 127 aaKnown RBP17.08■□□□□ 0.32
USB1-215ENST00000569252 SMARCB1Q12824 385 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 LIMS2Q7Z4I7 341 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 FMNL3Q8IVF7 1028 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 ARHGEF19Q8IW93 802 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 DRC7Q8IY82 874 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 RPGRIP1Q96KN7 1286 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 HEXIM2Q96MH2 286 aaKnown RBP17.08■□□□□ 0.32
USB1-215ENST00000569252 STK33Q9BYT3 514 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 MTRRQ9UBK8 725 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
USB1-215ENST00000569252 IRAK3Q9Y616 596 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 CFAP54Q96N23 3096 aa17.08■□□□□ 0.32
USB1-215ENST00000569252 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
USB1-215ENST00000569252 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 C2orf71A6NGG8 1288 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 FSCN2O14926 492 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 CCDC172P0C7W6 258 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 LMO2P25791 158 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 KLK7P49862 253 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 NFE2Q16621 373 aaPredicted RBP17.07■□□□□ 0.32
USB1-215ENST00000569252 ZNF394Q53GI3 561 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 SMYD5Q6GMV2 418 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 TMEM270Q6UE05 265 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 GLYCTKQ8IVS8 523 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 KBTBD7Q8WVZ9 684 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 EDAQ92838 391 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 TMEM176AQ96HP8 235 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 RXFP1Q9HBX9 757 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 KIAA1257Q9ULG3 409 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 SIK3Q9Y2K2 1263 aa17.07■□□□□ 0.32
USB1-215ENST00000569252 SCN1AP35498 2009 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 DMDP11532 3685 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 HIDE1A8MVS5 230 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 LILRB3O75022 631 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 PDGFBP01127 241 aaPredicted RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 PTPN1P18031 435 aaKnown RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 ACAT1P24752 427 aaKnown RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 BPIFB4P59827 614 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 INCA1Q0VD86 236 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 TCF15Q12870 199 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 SPECC1LQ69YQ0 1117 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 GJB7Q6PEY0 223 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 C4orf50Q6ZRC1 276 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 TRIM67Q6ZTA4 783 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 PALB2Q86YC2 1186 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 PBXIP1Q96AQ6 731 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 CDCA3Q99618 268 aaPredicted RBP17.06■□□□□ 0.32
USB1-215ENST00000569252 ARID3AQ99856 593 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms