RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 STARD6P59095 220 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PSMC1P62191 440 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 GPC5P78333 572 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 BIRC3Q13489 604 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 KCNB1Q14721 858 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 UBXN2BQ14CS0 331 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 MLF2Q15773 248 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 CAMK4Q16566 473 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 MGAT5BQ3V5L5 792 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 C1orf220Q5T0J3 134 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 TDRD10Q5VZ19 366 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 C1orf210Q8IVY1 113 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 NPAS3Q8IXF0 933 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 C12orf56Q8IXR9 622 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 KIAA2013Q8IYS2 634 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 ADGRF2Q8IZF7 708 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 FAM200AQ8TCP9 573 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PARD3BQ8TEW8 1205 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 KBTBD7Q8WVZ9 684 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 CCDC47Q96A33 483 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 SHDQ96IW2 340 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 ZNF512Q96ME7 567 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 ZNF560Q96MR9 790 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PLA2G2FQ9BZM2 168 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 DNAJC25Q9H1X3 360 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 ZNF334Q9HCZ1 680 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 CHMP5Q9NZZ3 219 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 NXF1Q9UBU9 619 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 NME7Q9Y5B8 376 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 KANSL1LA0AUZ9 987 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 MYBPHLA2RUH7 354 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 TRIM49BA6NDI0 452 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 CALUO43852 315 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-211ENST00000568291 MOSPD3O75425 235 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 VNN1O95497 513 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 ATF6P18850 670 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 NR2F2P24468 414 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 CYP2F1P24903 491 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 PNPLA4P41247 253 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 SNRPFP62306 86 aaKnown RBP10.19□□□□□ -0.78
SF3B3-211ENST00000568291 PFKPQ01813 784 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 MYO1EQ12965 1108 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 ORC1Q13415 861 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 ADAM9Q13443 819 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 TRPC3Q13507 836 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 MYBPC2Q14324 1141 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 SURF1Q15526 300 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 TEAD2Q15562 447 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 DDR2Q16832 855 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 WDR72Q3MJ13 1102 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 STXBP5Q5T5C0 1151 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 SPOPLQ6IQ16 392 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 SCARA5Q6ZMJ2 495 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 GUF1Q8N442 669 aaKnown RBP10.19□□□□□ -0.78
SF3B3-211ENST00000568291 LRRC52Q8N7C0 313 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 SMARCE1Q969G3 411 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 DPEP3Q9H4B8 488 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 GDAP2Q9NXN4 497 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 MAN1B1Q9UKM7 699 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 DSEQ9UL01 958 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-211ENST00000568291 ANK1P16157 1881 aa10.19□□□□□ -0.78
SF3B3-211ENST00000568291 SPTBN2O15020 2390 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 A0A1W2PRU2 124 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 LAMTOR5O43504 91 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 KINO60870 393 aaKnown RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 C4BPAP04003 597 aaKnown RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 BMP6P22004 513 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 VIPR2P41587 438 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 ALDH1A3P47895 512 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 GCLMP48507 274 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 PRKCQQ04759 706 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 PPP3CAQ08209 521 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 FAM78AQ5JUQ0 283 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 PRSS36Q5K4E3 855 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 ANKRD40Q6AI12 368 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 TANGO2Q6ICL3 276 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 KLHL10Q6JEL2 608 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 PDZD4Q76G19 769 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 DNAJB7Q7Z6W7 309 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 SLC9A9Q8IVB4 645 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 SHKBP1Q8TBC3 707 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 RMDN1Q96DB5 314 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 DDX23Q9BUQ8 820 aaKnown RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 LRRC3Q9BY71 257 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 BCO2Q9BYV7 579 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 SDCBP2Q9H190 292 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 XYLT2Q9H1B5 865 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 CRTAC1Q9NQ79 661 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 SPATA6Q9NWH7 488 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 CGNQ9P2M7 1197 aaKnown RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 TRAF3IP3Q9Y228 551 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-211ENST00000568291 NCOR2Q9Y618 2525 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms