RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 RAG1P15918 1043 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 IGBP1P78318 339 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ALCAMQ13740 583 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 C16orf72Q14CZ0 275 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ASRGL1Q7L266 308 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ACTL9Q8TC94 416 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 EME1Q96AY2 570 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 SLC7A6OSQ96CW6 309 aaPredicted RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 THAP11Q96EK4 314 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 NGRNQ9NPE2 291 aaKnown RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 ATXN10Q9UBB4 475 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 PIK3C2AO00443 1686 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 DNALI1O14645 258 aaPredicted RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 FSCN2O14926 492 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ZNF189O75820 626 aaPredicted RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 SLITRK3O94933 977 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ZBED1O96006 694 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 COPAP53621 1224 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 EML3Q32P44 896 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 CEP55Q53EZ4 464 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ALKBH8Q96BT7 664 aaKnown RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 TAGLN3Q9UI15 199 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 DAGLAQ9Y4D2 1042 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 SRCAPQ6ZRS2 3230 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 GOLGA8QA0A0J9YX86 632 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 GOLGA8OA6NCC3 632 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 PRR5-ARHGAP8B1AHC4 643 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 TCP10L2B9ZVM9 353 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 GIPC1O14908 333 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 MAP3K13O43283 966 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 ARL1P40616 181 aaPredicted RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 ELK3P41970 407 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 ARHGAP8P85298 464 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 FMO1Q01740 532 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 RARS2Q5T160 578 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 RAPH1Q70E73 1250 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 ULK2Q8IYT8 1036 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 RCOR2Q8IZ40 523 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 DRAXINQ8NBI3 349 aaPredicted RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 OR6Y1Q8NGX8 325 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 DEPTORQ8TB45 409 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 PRR11Q96HE9 360 aaPredicted RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 IP6K2Q9UHH9 426 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 TDRKHQ9Y2W6 561 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 IVNS1ABPQ9Y6Y0 642 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 EIF3DO15371 548 aaKnown RBP eCLIP11.4□□□□□ -0.58
PALB2-206ENST00000568219 OR6B1O95007 311 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 C6orf222P0C671 652 aaPredicted RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 ARP10275 920 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 PMLP29590 882 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 TAS2R40P59535 323 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 OTUD4Q01804 1114 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 PEX6Q13608 980 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 KBTBD12Q3ZCT8 623 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 C16orf46Q6P387 395 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 ZCCHC9Q8N567 271 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 GLIS1Q8NBF1 620 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 SPATA18Q8TC71 538 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 PARVAQ9NVD7 372 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 PIH1D1Q9NWS0 290 aaKnown RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 PRKAG3Q9UGI9 489 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
PALB2-206ENST00000568219 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 PCDHB2Q9Y5E7 798 aa11.4□□□□□ -0.58
PALB2-206ENST00000568219 E9PBE3 544 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 KLHL41O60662 606 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 ALADP13716 330 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 SERPINB5P36952 375 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 RPL10AP62906 217 aaKnown RBP11.4□□□□□ -0.59
PALB2-206ENST00000568219 GPSM2P81274 684 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 PDK3Q15120 406 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 SV2AQ7L0J3 742 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 NLRX1Q86UT6 975 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 MCOLN2Q8IZK6 566 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 FAM210AQ96ND0 272 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 SRPK1Q96SB4 655 aaKnown RBP11.4□□□□□ -0.59
PALB2-206ENST00000568219 ARHGAP26Q9UNA1 814 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 DNAJC16Q9Y2G8 782 aa11.4□□□□□ -0.59
PALB2-206ENST00000568219 CCDC78A2IDD5 438 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 CAPN8A6NHC0 703 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 F8VP50 259 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 PROSCO94903 275 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 OASLQ15646 514 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 BRINP3Q76B58 766 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 C10orf82Q8WW14 230 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 USP13Q92995 863 aaPredicted RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 ITFG2Q969R8 447 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SPATA16Q9BXB7 569 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 XAB2Q9HCS7 855 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 OLFML3Q9NRN5 406 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 CYB561D2O14569 222 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 GRAP2O75791 330 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 NDUFB10O96000 172 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms