RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 C12orf56Q8IXR9 622 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 FAM186BQ8IYM0 893 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 DTWD2Q8NBA8 298 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM161BQ8NDZ6 487 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 NEK11Q8NG66 645 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 PPTC7Q8NI37 304 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 NPLOC4Q8TAT6 608 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 ATP8B4Q8TF62 1192 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 COPS5Q92905 334 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM143Q96AN5 459 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 FBXL18Q96ME1 805 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 CEP89Q96ST8 783 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 ASPNQ9BXN1 380 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 POLR3FQ9H1D9 316 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-218ENST00000568153 AGPAT3Q9NRZ7 376 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 ADGRE2Q9UHX3 823 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 GJD2Q9UKL4 321 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 ST14Q9Y5Y6 855 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 UTRNP46939 3433 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 IGSF9BQ9UPX0 1349 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 RLFQ13129 1914 aa6.68□□□□□ -1.34
CAPN3-218ENST00000568153 A0A1W2PQH9 124 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 K7ERI5 159 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 MAPK13O15264 365 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 ZSCAN12O43309 604 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 MFAP3LO75121 409 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 OFD1O75665 1012 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 AFPP02771 609 aaKnown RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 TUBB4AP04350 444 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 GYPCP04921 128 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 HOXC6P09630 235 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 KRT13P13646 458 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 CNGA1P29973 690 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 ETFBP38117 255 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 RGS2P41220 211 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 ADCYAP1R1P41586 468 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 CASP4P49662 377 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 FXR1P51114 621 aaKnown RBP eCLIP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 CYP2J2P51589 502 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 EFNA5P52803 228 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 SOX10P56693 466 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 TNFAIP2Q03169 654 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 ARHGAP1Q07960 439 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 CRHR2Q13324 411 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 HSP90AA2PQ14568 343 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 MXD4Q14582 209 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 PLCB4Q15147 1175 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 DEFB115Q30KQ5 88 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 BRDTQ58F21 947 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 DNTTIP2Q5QJE6 756 aaKnown RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 PRAMEF19Q5SWL8 479 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM63BQ5T3F8 832 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 OLFML2BQ68BL8 750 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 CYP26C1Q6V0L0 522 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 SPRED2Q7Z698 418 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 CCAR2Q8N163 923 aaKnown RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 XXYLT1Q8NBI6 393 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 FLCNQ8NFG4 579 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 DEPTORQ8TB45 409 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 AFG1LQ8WV93 481 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 PRPF31Q8WWY3 499 aaKnown RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 USP6NLQ92738 828 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 BORCS6Q96GS4 357 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 HSPA12BQ96MM6 686 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 KATNBL1Q9H079 304 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 PCIF1Q9H4Z3 704 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 XPNPEP1Q9NQW7 623 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 TRMT1Q9NXH9 659 aaKnown RBP6.67□□□□□ -1.34
CAPN3-218ENST00000568153 ERAP1Q9NZ08 941 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 SIK3Q9Y2K2 1263 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 ADGRA2Q96PE1 1338 aa6.67□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM265A0A087WTH1 108 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 IGKV6-21A0A0C4DH24 114 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 ANKRD63C9JTQ0 380 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 TNPO2O14787 897 aaKnown RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 MAGEB2O15479 319 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SRGAP2CP0DJJ0 459 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 CYP2B6P20813 491 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 GLRA2P23416 452 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 MARK3P27448 753 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 NAMPTP43490 491 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 IRAK1P51617 712 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 CLCN7P51798 805 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 CHMP4BP1P59074 171 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 CETN1Q12798 172 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 BNIP3Q12983 259 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 NOGQ13253 232 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 GRM1Q13255 1194 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 PTPN14Q15678 1187 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 DGKDQ16760 1214 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 EXOC3L4Q17RC7 722 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 TCERG1LQ5VWI1 586 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 E4F1Q66K89 784 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SLFN12LQ6IEE8 588 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 EFCAB12Q6NXP0 572 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 ZNF574Q6ZN55 896 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 GBP6Q6ZN66 633 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms