RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ZBTB6Q15916 424 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 NAA35Q5VZE5 725 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 WDR93Q6P2C0 686 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 FBXO38Q6PIJ6 1188 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 CXCL17Q6UXB2 119 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 UBL4BQ8N7F7 174 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 TMEM35BQ8NCS4 154 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 NUP85Q9BW27 656 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 CDHR5Q9HBB8 845 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 CHST12Q9NRB3 414 aa15.52■□□□□ 0.08
COMMD4-221ENST00000567935 GRIN2DO15399 1336 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 GRXCR2A6NFK2 248 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 PGRMC1O00264 195 aaKnown RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 PDE2AO00408 941 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 ATP8B1O43520 1251 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 GFRA3O60609 400 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 CAND2O75155 1236 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 KCNE1P15382 129 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 ZSCAN20P17040 1043 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 CYP3A5P20815 502 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 FGFR4P22455 802 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 POLR2BP30876 1174 aaKnown RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 PNPLA4P41247 253 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 SLC1A1P43005 524 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 ZNF200P98182 395 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 INCA1Q0VD86 236 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 STILQ15468 1287 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 PPP2R5EQ16537 467 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 WDR72Q3MJ13 1102 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 IER5LQ5T953 404 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 TMCO3Q6UWJ1 677 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 ALKAL1Q6UXT8 129 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 MON1BQ7L1V2 547 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 DNAAF5Q86Y56 855 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 RASGEF1CQ8N431 466 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 NOA1Q8NC60 698 aaKnown RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 HNRNPLLQ8WVV9 542 aaKnown RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 ELMO3Q96BJ8 720 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 PARD6BQ9BYG5 372 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 LHX5Q9H2C1 402 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 SNTG2Q9NY99 539 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 NXF1Q9UBU9 619 aaKnown RBP15.51■□□□□ 0.07
COMMD4-221ENST00000567935 AGAP1Q9UPQ3 857 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 C5orf42Q9H799 3197 aa15.51■□□□□ 0.07
COMMD4-221ENST00000567935 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CCDC66A2RUB6 948 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CCDC188H7C350 402 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 RECQL4O94761 1208 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CD58P19256 250 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CTNNA2P26232 953 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CXCR5P32302 372 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 RBM10P98175 930 aaKnown RBP15.5■□□□□ 0.07
COMMD4-221ENST00000567935 HERC6Q8IVU3 1022 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 TMEM40Q8WWA1 233 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CYFIP2Q96F07 1278 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 SLC9A7Q96T83 725 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 PLVAPQ9BX97 442 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 EIF2AQ9BY44 585 aaKnown RBP15.5■□□□□ 0.07
COMMD4-221ENST00000567935 ANKZF1Q9H8Y5 726 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 ADAM22Q9P0K1 906 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 BARX2Q9UMQ3 279 aaPredicted RBP15.5■□□□□ 0.07
COMMD4-221ENST00000567935 ALG6Q9Y672 507 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 CDY2AQ9Y6F7 541 aa15.5■□□□□ 0.07
COMMD4-221ENST00000567935 LCHNA4D1U4 455 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 GPR182O15218 404 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 CILPO75339 1184 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 WEE2P0C1S8 567 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 VDRP11473 427 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 MMP8P22894 467 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 PTPN5P54829 565 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 ITGA7Q13683 1181 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 MAP9Q49MG5 647 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 UBXN11Q5T124 520 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 PLEKHA7Q6IQ23 1121 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 GDF6Q6KF10 455 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-221ENST00000567935 SCARA5Q6ZMJ2 495 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 FAM43BQ6ZT52 329 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-221ENST00000567935 FAM228AQ86W67 206 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 ZNF560Q96MR9 790 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 PSMB7Q99436 277 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 SEZ6LQ9BYH1 1024 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 MIS12Q9H081 205 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 ARFGAP3Q9NP61 516 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 PARVAQ9NVD7 372 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 LMCD1Q9NZU5 365 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 STRIP2Q9ULQ0 834 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 POLIQ9UNA4 740 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 PACSIN2Q9UNF0 486 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-221ENST00000567935 SQORQ9Y6N5 450 aa15.49■□□□□ 0.07
COMMD4-221ENST00000567935 SCN5AQ14524 2016 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 TRIP11Q15643 1979 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 DDX3YO15523 660 aaKnown RBP15.48■□□□□ 0.07
COMMD4-221ENST00000567935 CEP104O60308 925 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 RPS6KA5O75582 802 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 PFKMP08237 780 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 FAM163BP0C2L3 166 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 MAN1A1P33908 653 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms