RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 EEF1DP3Q658K8 133 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 EXOC3L1Q86VI1 746 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 HERPUD2Q9BSE4 406 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 A0A087WZ62 844 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 A6NJR5 290 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 CDH16O75309 829 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 ZNF865P0CJ78 1059 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-214ENST00000567572 HNRNPH1P31943 449 aaKnown RBP18.72■□□□□ 0.59
CMTM3-214ENST00000567572 CDH5P33151 784 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-214ENST00000567572 INHBEP58166 350 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 PRAMEF19Q5SWL8 479 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 NIPA2Q8N8Q9 360 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 ZNF606Q8WXB4 792 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 ARHGEF2Q92974 986 aaKnown RBP18.72■□□□□ 0.59
CMTM3-214ENST00000567572 FAXDC2Q96IV6 333 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 FDXACB1Q9BRP7 624 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-214ENST00000567572 CDT1Q9H211 546 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 PPCSQ9HAB8 311 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 AKT3Q9Y243 479 aa18.72■□□□□ 0.59
CMTM3-214ENST00000567572 R3HDM2Q9Y2K5 976 aaKnown RBP18.72■□□□□ 0.59
CMTM3-214ENST00000567572 TMEM191CA6NGB0 347 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 FAM155AB1AL88 458 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 TJP3O95049 919 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 ACSL3O95573 720 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 VTNP04004 478 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 TMEM191BP0C7N4 346 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 KLRC2P26717 231 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 CHKAP35790 457 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 SLCO1A2P46721 670 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 TAS2R40P59535 323 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 YWHAEP62258 255 aaKnown RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 NFX1Q12986 1120 aaKnown RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 HIBCHQ6NVY1 386 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 ZCCHC9Q8N567 271 aaKnown RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 TMEM35BQ8NCS4 154 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 PLCD4Q9BRC7 762 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 DDX23Q9BUQ8 820 aaKnown RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 NIF3L1Q9GZT8 377 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 DDX56Q9NY93 547 aaKnown RBP18.71■□□□□ 0.59
CMTM3-214ENST00000567572 NINJ2Q9NZG7 142 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 PCDHGC3Q9UN70 934 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 ANK1P16157 1881 aa18.71■□□□□ 0.59
CMTM3-214ENST00000567572 RASSF9O75901 435 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 DNAJC8O75937 253 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 ECM2O94769 699 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 CALCAP01258 141 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 IGHA2P01877 340 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 EIF4BP23588 611 aaKnown RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 NR1H3Q13133 447 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 PIGHQ14442 188 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 FBXW10Q5XX13 1052 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 OLFML2BQ68BL8 750 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 TTC25Q96NG3 672 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 PRMT1Q99873 361 aaKnown RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 TCRBV5S1A1TA0A578 114 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 CCT8L1PA6NM43 557 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 F2P00734 622 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 LONRF1Q17RB8 773 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 SGSM1Q2NKQ1 1148 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 UBAP2Q5T6F2 1119 aaKnown RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 IZUMO3Q5VZ72 239 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 POLNQ7Z5Q5 900 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 CDR2LQ86X02 465 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 PASD1Q8IV76 773 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 THNSL1Q8IYQ7 743 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 LRRC34Q8IZ02 419 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 CEP120Q8N960 986 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 FAM212AQ96EL1 285 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 FRMD8P1Q9BZ68 369 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 PHACTR1Q9C0D0 580 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 MTMR12Q9C0I1 747 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 STRIP2Q9ULQ0 834 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 DRG1Q9Y295 367 aaKnown RBP18.7■□□□□ 0.58
CMTM3-214ENST00000567572 EFR3BQ9Y2G0 817 aa18.7■□□□□ 0.58
CMTM3-214ENST00000567572 DYNC1LI2O43237 492 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-214ENST00000567572 LIASO43766 372 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 B4GALT4O60513 344 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 CCL14Q16627 93 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 TMEM132AQ24JP5 1023 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 SWT1Q5T5J6 900 aaKnown RBP18.69■□□□□ 0.58
CMTM3-214ENST00000567572 SCARA3Q6AZY7 606 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 DNAJC24Q6P3W2 148 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 KIAA0319LQ8IZA0 1049 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 UHMK1Q8TAS1 419 aaKnown RBP18.69■□□□□ 0.58
CMTM3-214ENST00000567572 SLITRK1Q96PX8 696 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 PPP1R16BQ96T49 567 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 APBA2Q99767 749 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 PDZD7Q9H5P4 517 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 CEP83Q9Y592 693 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 TLL2Q9Y6L7 1015 aa18.69■□□□□ 0.58
CMTM3-214ENST00000567572 RRN3P2A6NIE6 340 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 GPR25O00155 361 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 CSDE1O75534 798 aaKnown RBP18.68■□□□□ 0.58
CMTM3-214ENST00000567572 CFHP08603 1231 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 MCF2P10911 925 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 RGS2P41220 211 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 SCTRP47872 440 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 XRCC4Q13426 336 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 DUOXA2Q1HG44 320 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms