RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TSHRP16473 764 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 HPCAP84074 193 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 NFX1Q12986 1120 aaKnown RBP26.25■■□□□ 1.79
FANCA-221ENST00000566889 B3GNT6Q6ZMB0 384 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 TRIM42Q8IWZ5 723 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 ALDH16A1Q8IZ83 802 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 MAML3Q96JK9 1138 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 WWP1Q9H0M0 922 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 BLOC1S6Q9UL45 172 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 MYH11P35749 1972 aa26.25■■□□□ 1.79
FANCA-221ENST00000566889 FAM237BA0A1B0GVD1 139 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 DENND3A2RUS2 1198 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 C6orf229H3BNL8 230 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 VCLP18206 1134 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 BGNP21810 368 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 GLRA2P23416 452 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 TM4SF1P30408 202 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 CHN2P52757 468 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 TAS2R40P59535 323 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 DEUP1Q05D60 604 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 KRT39Q6A163 491 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 CIAPIN1Q6FI81 312 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 ZNF677Q86XU0 584 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 ANKMY2Q8IV38 441 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 RCOR2Q8IZ40 523 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 SEMA4DQ92854 862 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 NMD3Q96D46 503 aaKnown RBP26.24■■□□□ 1.79
FANCA-221ENST00000566889 CBWD1Q9BRT8 395 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 PCDH9Q9HC56 1237 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 CNTN3Q9P232 1028 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 SERPINB13Q9UIV8 391 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 IQANK1A0A1B0GTG1 560 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 ZNF862O60290 1169 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 PSMD10O75832 226 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 IRX4P78413 519 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 EFTUD2Q15029 972 aaKnown RBP eCLIP26.24■■□□□ 1.793e-8■■■■□ 26
FANCA-221ENST00000566889 FBXO27Q8NI29 283 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 CYP2W1Q8TAV3 490 aa26.24■■□□□ 1.79
FANCA-221ENST00000566889 C12orf65Q9H3J6 166 aaKnown RBP26.24■■□□□ 1.79
FANCA-221ENST00000566889 C2orf71A6NGG8 1288 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 GOLGA8RI6L899 631 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 STIP1P31948 543 aaKnown RBP26.23■■□□□ 1.79
FANCA-221ENST00000566889 PRELPP51888 382 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 BPIFB4P59827 614 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 SLC18A2Q05940 514 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 LIN9Q5TKA1 542 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 C3orf62Q6ZUJ4 267 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 CLPTM1LQ96KA5 538 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 C7orf26Q96N11 449 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 CLIC5Q9NZA1 410 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 PPARGC1AQ9UBK2 798 aaKnown RBP26.23■■□□□ 1.79
FANCA-221ENST00000566889 IGLV3-22A0A075B6J6 115 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 CD58P19256 250 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 CLCN2P51788 898 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 SULT2A1Q06520 285 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 ANKRD20A4Q4UJ75 823 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 ENOSF1Q7L5Y1 443 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 TTC17Q96AE7 1141 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 BTBD9Q96Q07 612 aa26.23■■□□□ 1.79
FANCA-221ENST00000566889 MRPL47Q9HD33 250 aaKnown RBP26.23■■□□□ 1.79
FANCA-221ENST00000566889 ARHGEF35A5YM69 484 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 I3L4J1 428 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 SSTR1P30872 391 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 PDK3Q15120 406 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 SFT2D3Q587I9 215 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 HAUS1Q96CS2 278 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 TIMMDC1Q9NPL8 285 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 ITGAVP06756 1048 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 EEF2P13639 858 aaKnown RBP26.22■■□□□ 1.79
FANCA-221ENST00000566889 ETS1P14921 441 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 NSFP46459 744 aaKnown RBP26.22■■□□□ 1.79
FANCA-221ENST00000566889 RPL5P46777 297 aaKnown RBP26.22■■□□□ 1.79
FANCA-221ENST00000566889 MMEL1Q495T6 779 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 EFHC1Q5JVL4 640 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 NLRX1Q86UT6 975 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 DAW1Q8N136 415 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 JADE3Q92613 823 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 PRICKLE1Q96MT3 831 aaPredicted RBP26.22■■□□□ 1.79
FANCA-221ENST00000566889 FAM111AQ96PZ2 611 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 TMEM8AQ9HCN3 771 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.22■■□□□ 1.794e-18■■■■■ 159.3
FANCA-221ENST00000566889 FARP1Q9Y4F1 1045 aaPredicted RBP26.22■■□□□ 1.79
FANCA-221ENST00000566889 PPME1Q9Y570 386 aa26.22■■□□□ 1.79
FANCA-221ENST00000566889 STRNO43815 780 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 FAM163BP0C2L3 166 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 SHMT1P34896 483 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 VCPP55072 806 aaKnown RBP26.21■■□□□ 1.79
FANCA-221ENST00000566889 KDSRQ06136 332 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 MSLNQ13421 630 aaPredicted RBP26.21■■□□□ 1.79
FANCA-221ENST00000566889 HIC1Q14526 733 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 HSP90AA5PQ58FG0 334 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 FBXO11Q86XK2 927 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 KLF6Q99612 283 aaPredicted RBP26.21■■□□□ 1.79
FANCA-221ENST00000566889 CCDC106Q9BWC9 280 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 CD209Q9NNX6 404 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 RAB20Q9NX57 234 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 SORCS3Q9UPU3 1222 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 ZHX2Q9Y6X8 837 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 MYPNQ86TC9 1320 aa26.21■■□□□ 1.79
FANCA-221ENST00000566889 RBBP6Q7Z6E9 1792 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms