RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 LRRC6Q86X45 466 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ARHGAP24Q8N264 748 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ATP11CQ8NB49 1132 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 TMEM161BQ8NDZ6 487 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 DCAKDQ8WVC6 231 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 GORASP1Q9BQQ3 440 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 C11orf70Q9BRQ4 267 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 PI4K2AQ9BTU6 479 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ARHGEF4Q9NR80 690 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 USTQ9Y2C2 406 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ESRRAP11474 423 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ITGB5P18084 799 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 QARSP47897 775 aaKnown RBP16.48■□□□□ 0.23
COMMD4-215ENST00000566843 DYNC1I2Q13409 638 aaKnown RBP16.48■□□□□ 0.23
COMMD4-215ENST00000566843 TFDP1Q14186 410 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 EFTUD2Q15029 972 aaKnown RBP eCLIP16.48■□□□□ 0.231e-7■■■■■ 52.3
COMMD4-215ENST00000566843 HIF1AQ16665 826 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ATP13A4Q4VNC1 1196 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 LRRC38Q5VT99 294 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 SLC39A4Q6P5W5 647 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 PCGF5Q86SE9 256 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 FEZF2Q8TBJ5 459 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 PAFAH2Q99487 392 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ZC3H12CQ9C0D7 883 aaKnown RBP16.48■□□□□ 0.23
COMMD4-215ENST00000566843 GPRC5CQ9NQ84 441 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 C1orf112Q9NSG2 853 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 IP6K2Q9UHH9 426 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ANGPTL2Q9UKU9 493 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 POLIQ9UNA4 740 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 PI4K2BG5E9Z4 385 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 SMAPO00193 183 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
COMMD4-215ENST00000566843 GH2P01242 217 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 TSHRP16473 764 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 GJC1P36383 396 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 NEK3P51956 506 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 POLE2P56282 527 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
COMMD4-215ENST00000566843 PPP1R2P3Q6NXS1 205 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 CCDC62Q6P9F0 684 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 SPOCD1Q6ZMY3 1216 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 NIPA1Q7RTP0 329 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 ANKMY2Q8IV38 441 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 ARHGAP18Q8N392 663 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 DTX3LQ8TDB6 740 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 DEFB129Q9H1M3 183 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 FBXO6Q9NRD1 293 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-215ENST00000566843 E7ESA3 106 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 BANF1O75531 89 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 KRT1P04264 644 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 PGM1P36871 562 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 ETV4P43268 484 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 ZBTB16Q05516 673 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 THOC5Q13769 683 aaKnown RBP16.47■□□□□ 0.23
COMMD4-215ENST00000566843 KAZNQ674X7 775 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 NCSTNQ92542 709 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 PCDHAC2Q9Y5I4 1007 aa16.47■□□□□ 0.23
COMMD4-215ENST00000566843 hCG_1818297A0A087WSY0 165 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 CFHP08603 1231 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 SSTR1P30872 391 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 YWHABP31946 246 aaKnown RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 SSR1P43307 286 aaKnown RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 ARL4CP56559 192 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 CUL3Q13618 768 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 PYROXD1Q8WU10 500 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 OXNAD1Q96HP4 312 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 GBP5Q96PP8 586 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 WDR83Q9BRX9 315 aaKnown RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 PPP1R12CQ9BZL4 782 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 C12orf65Q9H3J6 166 aaKnown RBP16.46■□□□□ 0.23
COMMD4-215ENST00000566843 KCNH7Q9NS40 1196 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 PCMTD2Q9NV79 361 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 KLHL11Q9NVR0 708 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 DNAJB4Q9UDY4 337 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 WASF2Q9Y6W5 498 aa16.46■□□□□ 0.23
COMMD4-215ENST00000566843 FCHO1O14526 889 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 IRF6O14896 467 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 LYNP07948 512 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 ECE1P42892 770 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 CIAPIN1Q6FI81 312 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 NET1Q7Z628 596 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-215ENST00000566843 PPIL6Q8IXY8 311 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 DRAXINQ8NBI3 349 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-215ENST00000566843 SLC35B2Q8TB61 432 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 POMGNT1Q8WZA1 660 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 PARVAQ9NVD7 372 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 CNTN3Q9P232 1028 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 KLF11O14901 512 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms