RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 COL4A2P08572 1712 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 CACNA1HO95180 2353 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 KIAA0391O15091 583 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 TGFB1I1O43294 461 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PRPF40AO75400 957 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PAPLNO95428 1278 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 DCNP07585 359 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 NPR3P17342 541 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 AOC1P19801 751 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CD72P21854 359 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CMA1P23946 247 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 GABRR2P28476 465 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 VIPR2P41587 438 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CASP4P49662 377 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 GPR15P49685 360 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 NDUFA8P51970 172 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 USP46P62068 366 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CYP4F8P98187 520 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CYP24A1Q07973 514 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 MYO1EQ12965 1108 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 BIRC3Q13489 604 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 MLF2Q15773 248 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 DUOXA2Q1HG44 320 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PRSS36Q5K4E3 855 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 TANGO2Q6ICL3 276 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 TPRG1Q6ZUI0 275 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 RTL10Q7L3V2 364 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 YAF2Q8IY57 180 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 ZNF507Q8TCN5 953 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CCDC47Q96A33 483 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 ZSWIM3Q96MP5 696 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CGRRF1Q99675 332 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PRRX2Q99811 253 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PLA2G2FQ9BZM2 168 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 DNAJC25Q9H1X3 360 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 ATXN3LQ9H3M9 355 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 BRD9Q9H8M2 597 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 ZFP14Q9HCL3 533 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 ZNF334Q9HCZ1 680 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 TMLHEQ9NVH6 421 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 GDE1Q9NZC3 331 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 WNT16Q9UBV4 365 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 SIX4Q9UIU6 781 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 MAPK8IP1Q9UQF2 711 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 PCDHB5Q9Y5E4 795 aa10.86□□□□□ -0.67
GTF3C1-206ENST00000566779 CACNA1IQ9P0X4 2223 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 PVALEFA0A1B0GWK0 134 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 KLRC4O43908 158 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 LRRN2O75325 713 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 AP1G2O75843 785 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 RPN1P04843 607 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 CYP11A1P05108 521 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 ATF6P18850 670 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 PAX3P23760 479 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 GDI1P31150 447 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 TNNC1P63316 161 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 POU5F1Q01860 360 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 STK4Q13043 487 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 TRPC3Q13507 836 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 SURF1Q15526 300 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 KNOP1Q1ED39 458 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 ARHGAP15Q53QZ3 475 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 GPR158Q5T848 1215 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 CEP135Q66GS9 1140 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 CNNM4Q6P4Q7 775 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 ITIH5Q86UX2 942 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 LRRTM3Q86VH5 581 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 SCN4BQ8IWT1 228 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 LRRC52Q8N7C0 313 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 LEMD2Q8NC56 503 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 KIAA0895Q8NCT3 520 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 SMARCD2Q92925 531 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 SCAND2PQ9GZW5 306 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 KCNH6Q9H252 994 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 KIAA1586Q9HCI6 787 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.85□□□□□ -0.677e-11■■■■■ 86.9
GTF3C1-206ENST00000566779 SLC2A4RGQ9NR83 387 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 MAFFQ9ULX9 164 aa10.85□□□□□ -0.67
GTF3C1-206ENST00000566779 ECI2O75521 394 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 PDGFRBP09619 1106 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 HAPLN1P10915 354 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 FCARP24071 287 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 CYP2F1P24903 491 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 TUFMP49411 452 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 MRE11P49959 708 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 CLCN5P51795 746 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 PFKPQ01813 784 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 CYP27A1Q02318 531 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 EHHADHQ08426 723 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 PSMD6Q15008 389 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 INTS6LQ5JSJ4 861 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms