RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GVINP1Q7Z2Y8 2422 aa21.67■■□□□ 1.06
CLN6-207ENST00000566347 PCSK1P29120 753 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 EHHADHQ08426 723 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 FZD5Q13467 585 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 ARHGAP29Q52LW3 1261 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 INTS6LQ5JSJ4 861 aaKnown RBP21.66■■□□□ 1.06
CLN6-207ENST00000566347 LMBRD2Q68DH5 695 aaPredicted RBP21.66■■□□□ 1.06
CLN6-207ENST00000566347 DPH6Q7L8W6 267 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 HS2ST1Q7LGA3 356 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 WDR49Q8IV35 697 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 ADGRF2Q8IZF7 708 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 ZNF687Q8N1G0 1237 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 HPDLQ96IR7 371 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 FAM84AQ96KN4 292 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 AGPAT3Q9NRZ7 376 aa21.66■■□□□ 1.06
CLN6-207ENST00000566347 PTPRJQ12913 1337 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 PVALEFA0A1B0GWK0 134 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 TGFB1I1O43294 461 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 PRPF40AO75400 957 aaKnown RBP21.65■■□□□ 1.06
CLN6-207ENST00000566347 CSH1P0DML2 217 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 CSH2P0DML3 217 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 RPL10AP62906 217 aaKnown RBP21.65■■□□□ 1.06
CLN6-207ENST00000566347 CYP4F8P98187 520 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 CSTF1Q05048 431 aaKnown RBP21.65■■□□□ 1.06
CLN6-207ENST00000566347 SNRNP35Q16560 246 aaKnown RBP21.65■■□□□ 1.06
CLN6-207ENST00000566347 OR5B17Q8NGF7 314 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 SCFD1Q8WVM8 642 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 PI4K2AQ9BTU6 479 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 C8orf33Q9H7E9 229 aaPredicted RBP21.65■■□□□ 1.06
CLN6-207ENST00000566347 CGNQ9P2M7 1197 aaKnown RBP21.65■■□□□ 1.06
CLN6-207ENST00000566347 RCOR1Q9UKL0 485 aa21.65■■□□□ 1.06
CLN6-207ENST00000566347 SOBPA7XYQ1 873 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 GABRDO14764 452 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 ACAT1P24752 427 aaKnown RBP21.64■■□□□ 1.05
CLN6-207ENST00000566347 DDX6P26196 483 aaKnown RBP eCLIP21.64■■□□□ 1.05
CLN6-207ENST00000566347 PLCB2Q00722 1185 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 PKP1Q13835 747 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 SOWAHAQ2M3V2 549 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 SCARA3Q6AZY7 606 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 CEP57L1Q8IYX8 460 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 BPIFB1Q8TDL5 484 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 FNBP1Q96RU3 617 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 PKMYT1Q99640 499 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 BLZF1Q9H2G9 400 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 CHRDQ9H2X0 955 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 PCDHGA2Q9Y5H1 932 aa21.64■■□□□ 1.05
CLN6-207ENST00000566347 EP300Q09472 2414 aaPredicted RBP21.64■■□□□ 1.05
CLN6-207ENST00000566347 DENND4CQ5VZ89 1909 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 ZNF292O60281 2723 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 KINO60870 393 aaKnown RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 PRAMEF12O95522 483 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 HMGA1P17096 107 aaKnown RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 CCNE1P24864 410 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 AFMP43652 599 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 KPNA1P52294 538 aaPredicted RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 NLRP12P59046 1061 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 DNM1Q05193 864 aaKnown RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 BMT2Q1RMZ1 405 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 CFAP221Q4G0U5 840 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 MAMSTRQ6ZN01 415 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 LIMS2Q7Z4I7 341 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 OSTM1Q86WC4 334 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 GPIHBP1Q8IV16 184 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 NELFCDQ8IXH7 590 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 CMTM8Q8IZV2 173 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 CELF5Q8N6W0 485 aaKnown RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 XXYLT1Q8NBI6 393 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 FUBP3Q96I24 572 aaKnown RBP eCLIP21.63■■□□□ 1.05
CLN6-207ENST00000566347 SLC46A2Q9BY10 475 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 PRMT8Q9NR22 394 aaPredicted RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 THG1LQ9NWX6 298 aaKnown RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 UXTQ9UBK9 157 aaPredicted RBP21.63■■□□□ 1.05
CLN6-207ENST00000566347 GTF3C4Q9UKN8 822 aa21.63■■□□□ 1.05
CLN6-207ENST00000566347 F11P03951 625 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 DLATP10515 647 aaKnown RBP21.62■■□□□ 1.05
CLN6-207ENST00000566347 TNNI1P19237 187 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 CYP2F1P24903 491 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 CASP1P29466 404 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 AVPR1AP37288 418 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 CYP2J2P51589 502 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 CYP24A1Q07973 514 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 MTAPQ13126 283 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 CUL4BQ13620 913 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 PPP2R5DQ14738 602 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 PSMD6Q15008 389 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 TRAPPC11Q7Z392 1133 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 SPATA2LQ8IUW3 424 aaPredicted RBP21.62■■□□□ 1.05
CLN6-207ENST00000566347 C12orf56Q8IXR9 622 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 RDH13Q8NBN7 331 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 SPRYD3Q8NCJ5 442 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 ATRIPQ8WXE1 791 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 MRPS31Q92665 395 aaKnown RBP21.62■■□□□ 1.05
CLN6-207ENST00000566347 LRRC3BQ96PB8 259 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 FAM126AQ9BYI3 521 aaPredicted RBP21.62■■□□□ 1.05
CLN6-207ENST00000566347 LMAN1LQ9HAT1 526 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 SLC39A2Q9NP94 309 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 ZSCAN32Q9NX65 697 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 MAGED2Q9UNF1 606 aaPredicted RBP21.62■■□□□ 1.05
CLN6-207ENST00000566347 SPTBN4Q9H254 2564 aa21.62■■□□□ 1.05
CLN6-207ENST00000566347 SLC38A8A6NNN8 435 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms