RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 INTS6LQ5JSJ4 861 aaKnown RBP19.69■□□□□ 0.74
USB1-213ENST00000566292 FAM26FQ5R3K3 315 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 TMEM86AQ8N2M4 240 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 ZNF507Q8TCN5 953 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 LEO1Q8WVC0 666 aaPredicted RBP19.69■□□□□ 0.74
USB1-213ENST00000566292 ANKRD36BP1Q96IX9 119 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 ZFYVE19Q96K21 471 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 CHRDQ9H2X0 955 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 PRMT8Q9NR22 394 aaPredicted RBP19.69■□□□□ 0.74
USB1-213ENST00000566292 OBP2AQ9NY56 170 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 PCDHA7Q9UN72 937 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 DPYSL4O14531 572 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 TGFB1I1O43294 461 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 PRPF40AO75400 957 aaKnown RBP19.68■□□□□ 0.74
USB1-213ENST00000566292 F11P03951 625 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 CCNE1P24864 410 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 SOX9P48436 509 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 MLLT6P55198 1093 aaPredicted RBP19.68■□□□□ 0.74
USB1-213ENST00000566292 MYL7Q01449 175 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 TAF12Q16514 161 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 NFE2Q16621 373 aaPredicted RBP19.68■□□□□ 0.74
USB1-213ENST00000566292 SOWAHAQ2M3V2 549 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 SDHAF4Q5VUM1 108 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 TSSK4Q6SA08 328 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 UNC13DQ70J99 1090 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 ADGRF2Q8IZF7 708 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 TOP6BLQ8N6T0 577 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 CSGALNACT1Q8TDX6 532 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 NELL1Q92832 810 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 GCNAQ96QF7 691 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 SLC46A2Q9BY10 475 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 SMG9Q9H0W8 520 aaKnown RBP19.68■□□□□ 0.74
USB1-213ENST00000566292 BLZF1Q9H2G9 400 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 LMAN1LQ9HAT1 526 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 GPR179Q6PRD1 2367 aa19.68■□□□□ 0.74
USB1-213ENST00000566292 SLC38A8A6NNN8 435 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 GABRDO14764 452 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 CHRNB1P11230 501 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 PDIA4P13667 645 aaKnown RBP19.67■□□□□ 0.74
USB1-213ENST00000566292 CYP2F1P24903 491 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 NLRP12P59046 1061 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 ARHGAP29Q52LW3 1261 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 RESP18Q5W5W9 173 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 LIMS2Q7Z4I7 341 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 SUMF1Q8NBK3 374 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 SPATA18Q8TC71 538 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 SCFD1Q8WVM8 642 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 MAGEF1Q9HAY2 307 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 AGPAT3Q9NRZ7 376 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 GTF3C4Q9UKN8 822 aa19.67■□□□□ 0.74
USB1-213ENST00000566292 KINO60870 393 aaKnown RBP19.66■□□□□ 0.74
USB1-213ENST00000566292 HSP90AA1P07900 732 aaKnown RBP19.66■□□□□ 0.74
USB1-213ENST00000566292 KPNA1P52294 538 aaPredicted RBP19.66■□□□□ 0.74
USB1-213ENST00000566292 SURF1Q15526 300 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 DDR2Q16832 855 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 DUOXA2Q1HG44 320 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 WDR44Q5JSH3 913 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 TXNDC11Q6PKC3 985 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 NELFCDQ8IXH7 590 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 SPRYD3Q8NCJ5 442 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 ZBTB44Q8NCP5 570 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 TTC8Q8TAM2 541 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 BPIFB1Q8TDL5 484 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 HPDLQ96IR7 371 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 C8orf33Q9H7E9 229 aaPredicted RBP19.66■□□□□ 0.74
USB1-213ENST00000566292 KIAA1586Q9HCI6 787 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 ABCB6Q9NP58 842 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 GTSE1Q9NYZ3 720 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 PCDHGA2Q9Y5H1 932 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 UBE4BO95155 1302 aa19.66■□□□□ 0.74
USB1-213ENST00000566292 MYBPHLA2RUH7 354 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 CLIC2O15247 247 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 TNNC2P02585 160 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 CSH1P0DML2 217 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 CSH2P0DML3 217 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 TDGF1P13385 188 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 ME1P48163 572 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 LHX1P48742 406 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 DNM1Q05193 864 aaKnown RBP19.65■□□□□ 0.74
USB1-213ENST00000566292 TNK2Q07912 1038 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 MYO1EQ12965 1108 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 CUL4BQ13620 913 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 GAS6Q14393 721 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 MAMSTRQ6ZN01 415 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 DPH6Q7L8W6 267 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 WDR49Q8IV35 697 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 CMTM8Q8IZV2 173 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 MAB21L3Q8N8X9 362 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 RDH13Q8NBN7 331 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 KBTBD7Q8WVZ9 684 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 MSANTD3Q96H12 275 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 ZSCAN32Q9NX65 697 aa19.65■□□□□ 0.74
USB1-213ENST00000566292 MAGED2Q9UNF1 606 aaPredicted RBP19.65■□□□□ 0.74
USB1-213ENST00000566292 DCHS1Q96JQ0 3298 aa19.64■□□□□ 0.74
USB1-213ENST00000566292 DMXL1Q9Y485 3027 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.64■□□□□ 0.73
USB1-213ENST00000566292 SPECC1L-ADORA2AF8WAN1 911 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 LILRB5O75023 590 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 ATP2C2O75185 946 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 TADA3O75528 432 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms