RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CDC5LQ99459 802 aaKnown RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 POLR3GLQ9BT43 218 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 TEX101Q9BY14 249 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 JADE2Q9NQC1 790 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 ADAMTS7Q9UKP4 1686 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF521Q96K83 1311 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 DDNO94850 711 aaPredicted RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 STARD3NLO95772 234 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 ZBED1O96006 694 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 GYPEP15421 78 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 ALDH1B1P30837 517 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 PSMC1P62191 440 aaKnown RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 TCTN3Q6NUS6 607 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 FUKQ8N0W3 1084 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 TMIEQ8NEW7 156 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 MAML1Q92585 1016 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF622Q969S3 477 aaKnown RBP eCLIP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF512Q96ME7 567 aaPredicted RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 TLR10Q9BXR5 811 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 XYLT2Q9H1B5 865 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 USP25Q9UHP3 1055 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 PHTF1Q9UMS5 762 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 TJP1Q07157 1748 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 COL15A1P39059 1388 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 GPR42O15529 346 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 JUNP05412 331 aaKnown RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 ITGB1P05556 798 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 TYRP14679 529 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 CRHR1P34998 444 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 RRS1Q15050 365 aaKnown RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 MAN2A1Q16706 1144 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 C19orf54Q5BKX5 351 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 C3orf38Q5JPI3 329 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 RNF220Q5VTB9 566 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 SPTY2D1Q68D10 685 aaPredicted RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 PLXDC1Q8IUK5 500 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 IL31RAQ8NI17 732 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 IL17RAQ96F46 866 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 FMNL2Q96PY5 1086 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 PSMD1Q99460 953 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 MAPK8IP3Q9UPT6 1336 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 A0A088AWK7 358 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 CAPN8A6NHC0 703 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 LEFTY2O00292 366 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 NBPF7P0C2Y1 421 aaPredicted RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 FLT3LGP49771 235 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 MTHFSP49914 203 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 WDR43Q15061 677 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 C1QL3Q5VWW1 255 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 CCSAPQ6IQ19 270 aaPredicted RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 FRMD5Q7Z6J6 570 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 CTU1Q7Z7A3 348 aaKnown RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 C3orf20Q8ND61 904 aa4.98□□□□□ -1.61
LINC00561-201ENST00000565815 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 SRP68Q9UHB9 627 aaKnown RBP4.98□□□□□ -1.61
LINC00561-201ENST00000565815 PHF2O75151 1096 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 MSX2P35548 267 aaPredicted RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 GZMKP49863 264 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 NPEPPSP55786 919 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 NFYCQ13952 458 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 TBC1D10BQ4KMP7 808 aaPredicted RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 KHDC1LQ5JSQ8 128 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF530Q6P9A1 599 aaPredicted RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 CLEC4GQ6UXB4 293 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 GADL1Q6ZQY3 521 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 SESTD1Q86VW0 696 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 FAM90A1Q86YD7 464 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 SUPT20HQ8NEM7 779 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 KCNC2Q96PR1 638 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 C11orf54Q9H0W9 315 aaPredicted RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 TMEM140Q9NV12 185 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 USP40Q9NVE5 1235 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 PGAP2Q9UHJ9 254 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 KNSTRNQ9Y448 316 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 LTBP1Q14766 1721 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 E9PLN8 166 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 MAFGO15525 162 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 HOXA3O43365 443 aaPredicted RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 CYP19A1P11511 503 aaPredicted RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 GRM7Q14831 915 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 TUBB8Q3ZCM7 444 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 CRB2Q5IJ48 1285 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 SRLQ86TD4 932 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 KIAA1191Q96A73 305 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 MRGPRX1Q96LB2 322 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 VKORC1Q9BQB6 163 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 FAM204AQ9H8W3 233 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 PTPRHQ9HD43 1115 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 CFAP20Q9Y6A4 193 aaKnown RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 MYH14Q7Z406 1995 aaKnown RBP4.97□□□□□ -1.61
LINC00561-201ENST00000565815 MRC1P22897 1456 aa4.97□□□□□ -1.61
LINC00561-201ENST00000565815 KLRG2A4D1S0 409 aaPredicted RBP4.96□□□□□ -1.61
LINC00561-201ENST00000565815 PAX4O43316 350 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 VCAM1P19320 739 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 SOX8P57073 446 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 NOMO3P69849 1222 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms