RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 RFC2P35250 354 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 MLH1P40692 756 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ASPAP45381 313 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 PDE6CP51160 858 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 GUCY2FP51841 1108 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 CUL1Q13616 776 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 FAM153CQ494X1 144 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 NAA35Q5VZE5 725 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 KCTD16Q68DU8 428 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ZNF598Q86UK7 904 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ZNF677Q86XU0 584 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 UBR7Q8N806 425 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 C3orf20Q8ND61 904 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ZNF473Q8WTR7 871 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ELMO3Q96BJ8 720 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 GAD1Q99259 594 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 KRT12Q99456 494 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 CXCL16Q9H2A7 254 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ELAC1Q9H777 363 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 TMEM39AQ9NV64 488 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ADAMTS1Q9UHI8 967 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 FAM153AQ9UHL3 310 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 TBX21Q9UL17 535 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ATP8B3O60423 1300 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 UMODL1Q5DID0 1318 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 A0A087X0T9 212 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 FAM228BP0C875 321 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 CYP11B1P15538 503 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 PAX3P23760 479 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 HNRNPH1P31943 449 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 RPL9P32969 192 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 MDH1P40925 334 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 GPNMBQ14956 572 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 SV2CQ496J9 727 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 SCARA3Q6AZY7 606 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 TMEM270Q6UE05 265 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 GLB1LQ6UWU2 654 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 MAATS1Q7Z4T9 603 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 RTN4RL1Q86UN2 441 aaPredicted RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 RBBP8NLQ8NC74 664 aaPredicted RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 RNF169Q8NCN4 708 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 DBF4BQ8NFT6 615 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 EPS8L1Q8TE68 723 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 RSPH1Q8WYR4 309 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 LPPQ93052 612 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 LRRC45Q96CN5 670 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 PBKQ96KB5 322 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 CABS1Q96KC9 395 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 MYCBPQ99417 103 aaPredicted RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 SYT11Q9BT88 431 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 DNAI2Q9GZS0 605 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 MCOLN1Q9GZU1 580 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 CISHQ9NSE2 258 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 NOCTQ9UK39 431 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 PLAAQ9Y263 795 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 CAPN7Q9Y6W3 813 aa9.99□□□□□ -0.81
CNEP1R1-206ENST00000565556 TDRD15B5MCY1 1934 aaKnown RBP9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 ESYT3A0FGR9 886 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 MEIS3P2A8K0S8 358 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 ENPP3O14638 875 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 FAM107AO95990 144 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 WEE2P0C1S8 567 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 MYZAPP0CAP1 466 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 TAF6P49848 677 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 VASPP50552 380 aaPredicted RBP9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 MNAT1P51948 309 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 CDR2Q01850 454 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 GRIK3Q13003 919 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 MTMR3Q13615 1198 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 LRRC26Q2I0M4 334 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 FBXW10Q5XX13 1052 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 ALKBH5Q6P6C2 394 aaKnown RBP9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 SLC47A2Q86VL8 602 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 NLRP14Q86W24 1093 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 GSTCDQ8NEC7 633 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 SLC30A5Q8TAD4 765 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 MYCBPAPQ8TBZ2 947 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 URGCPQ8TCY9 931 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 CALR3Q96L12 384 aaKnown RBP9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 UROC1Q96N76 676 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 ISCUQ9H1K1 167 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 TMEM161AQ9NX61 479 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 GDAP2Q9NXN4 497 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 NAGPAQ9UK23 515 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 INTUQ9ULD6 942 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 POLIQ9UNA4 740 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 SCN1AP35498 2009 aa9.98□□□□□ -0.81
CNEP1R1-206ENST00000565556 KIAA0100Q14667 2235 aaKnown RBP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 ZSCAN5CA6NGD5 496 aaPredicted RBP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 KPNA7A9QM74 516 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 DDX3XO00571 662 aaKnown RBP eCLIP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 HOXA2O43364 376 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms