RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LRRC8DQ7L1W4 858 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 ECHDC2Q86YB7 292 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 ADGRF2Q8IZF7 708 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 PDCL2Q8N4E4 241 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 C12orf29Q8N999 325 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 KRT35Q92764 455 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 RNPC3Q96LT9 517 aaKnown RBP20.7■□□□□ 0.9
CLN6-205ENST00000564846 MIS12Q9H081 205 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 RNF208Q9H0X6 261 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 SYNCQ9H7C4 482 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 WBP1LQ9NX94 342 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 IP6K2Q9UHH9 426 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 RAB21Q9UL25 225 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 NME7Q9Y5B8 376 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 PODXLO00592 558 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 WARSP23381 471 aaKnown RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 MCM3P25205 808 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 MTFR1Q15390 333 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 GOLGA7BQ2TAP0 167 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 PPP1R15BQ5SWA1 713 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 DCUN1D2Q6PH85 259 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 FAM43BQ6ZT52 329 aaPredicted RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 SLC24A5Q71RS6 500 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 ZNF598Q86UK7 904 aaKnown RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 FTHL17Q9BXU8 183 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 DNAH12Q6ZR08 3092 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 CYB561D2O14569 222 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 EOMESO95936 686 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 SETSIPP0DME0 302 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 FGFR1P11362 822 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 GABRB2P47870 512 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 CLCNKBP51801 687 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 RWDD2BP57060 319 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 GRIK3Q13003 919 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 ZNF268Q14587 947 aaPredicted RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 GLE1Q53GS7 698 aaKnown RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 PPP1R26Q5T8A7 1209 aaPredicted RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 CYP4A22Q5TCH4 519 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 MTERF4Q7Z6M4 381 aaKnown RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 UBA3Q8TBC4 463 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 IPO4Q8TEX9 1081 aaKnown RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 DDX27Q96GQ7 796 aaKnown RBP20.69■□□□□ 0.9
CLN6-205ENST00000564846 TNIP3Q96KP6 325 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 CPXM1Q96SM3 734 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 PNKPQ96T60 521 aa20.69■□□□□ 0.9
CLN6-205ENST00000564846 CCDC188H7C350 402 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 INPPL1O15357 1258 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 MARCKSL1P49006 195 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 PSMC1P62191 440 aaKnown RBP20.68■□□□□ 0.9
CLN6-205ENST00000564846 BRD3Q15059 726 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 WDR93Q6P2C0 686 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 PLVAPQ9BX97 442 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 HESX1Q9UBX0 185 aa20.68■□□□□ 0.9
CLN6-205ENST00000564846 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.68■□□□□ 0.9
CLN6-205ENST00000564846 CCDC151A5D8V7 595 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 SIGLEC16A6NMB1 481 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 C9IYK1 514 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 KRIT1O00522 736 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 MYCP01106 439 aaPredicted RBP20.67■□□□□ 0.9
CLN6-205ENST00000564846 FGGP02679 453 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 ERBB2P04626 1255 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 PAX3P23760 479 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 RPL7AP62424 266 aaKnown RBP20.67■□□□□ 0.9
CLN6-205ENST00000564846 UPP1Q16831 310 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 PKDCCQ504Y2 493 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 CPNE8Q86YQ8 564 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 RUBCNQ92622 972 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 MCEEQ96PE7 176 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 DPEP3Q9H4B8 488 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 FAM49BQ9NUQ9 324 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
CLN6-205ENST00000564846 PITPNM1O00562 1244 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 CAPN15O75808 1086 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 POMCP01189 267 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 PDGFRBP09619 1106 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 KRT3P12035 628 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 LMO2P25791 158 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 CLCN6P51797 869 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 SNX16P57768 344 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 FAM189BP81408 668 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 ZNF211Q13398 564 aaPredicted RBP20.67■□□□□ 0.9
CLN6-205ENST00000564846 PIGHQ14442 188 aaPredicted RBP20.67■□□□□ 0.9
CLN6-205ENST00000564846 LONRF2Q1L5Z9 754 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 SEL1L2Q5TEA6 688 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 C8orf74Q6P047 294 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 RTN4RL1Q86UN2 441 aaPredicted RBP20.67■□□□□ 0.9
CLN6-205ENST00000564846 XYLT1Q86Y38 959 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 TMEM86AQ8N2M4 240 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 SENP8Q96LD8 212 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 UROC1Q96N76 676 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 LRRC1Q9BTT6 524 aa20.67■□□□□ 0.9
CLN6-205ENST00000564846 GABRDO14764 452 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 PSTPIP1O43586 416 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 GJB6O95452 261 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 PFKMP08237 780 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 TTC30AQ86WT1 665 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 RHOT1Q8IXI2 618 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 NIPA2Q8N8Q9 360 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 STK32AQ8WU08 396 aa20.66■□□□□ 0.9
CLN6-205ENST00000564846 MCRS1Q96EZ8 462 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms