RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 LRRC8CQ8TDW0 803 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 TFAP2BQ92481 460 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 LRRC37BQ96QE4 947 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 HAO1Q9UJM8 370 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 SMG5Q9UPR3 1016 aaKnown RBP16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 USH1CQ9Y6N9 552 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 KRT4P19013 534 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 CAPSQ13938 189 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 ANKRD22Q5VYY1 191 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 TMEM35BQ8NCS4 154 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 PCDH9Q9HC56 1237 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 CLUHO75153 1309 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 SLC18A1P54219 525 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 LACTBP83111 547 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 ATP11AP98196 1134 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 TFDP1Q14186 410 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 HIF1AQ16665 826 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 HHATQ5VTY9 493 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 RGS9BPQ6ZS82 235 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 SLC35B2Q8TB61 432 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 ZWILCHQ9H900 591 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 BATF3Q9NR55 127 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 TXLNGQ9NUQ3 528 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 PSMC3IPQ9P2W1 217 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 RABGEF1Q9UJ41 708 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 SHOC2Q9UQ13 582 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 C3orf70A6NLC5 250 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 ATP2A1O14983 1001 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 RFC1P35251 1148 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 FNBP1LQ5T0N5 605 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 PRAMEF18Q5VWM3 479 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 LVRNQ6Q4G3 990 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 SAMD7Q7Z3H4 446 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 ZNF280CQ8ND82 737 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 SENP1Q9P0U3 644 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
GTF3C1-205ENST00000564747 LSM8O95777 96 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 PTPN7P35236 360 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 BRSK2Q8IWQ3 736 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ACTL9Q8TC94 416 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ZNF75CPQ92670 426 aaPredicted RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 C12orf65Q9H3J6 166 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 GINM1Q9NU53 330 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 DDX56Q9NY93 547 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 SLC24A2Q9UI40 661 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 PARP14Q460N5 1801 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ATG7O95352 703 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 T-ENOLP0DO92 83 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 IL1R2P27930 398 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 GEMIN4P57678 1058 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 EFHC2Q5JST6 749 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 OTOAQ7RTW8 1153 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ARFGAP1Q8N6T3 406 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 PYROXD1Q8WU10 500 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
GTF3C1-205ENST00000564747 WDR91A4D1P6 747 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 FAM189A1O60320 539 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 CNTN2Q02246 1040 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 RNASELQ05823 741 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF449Q6P9G9 518 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 C3orf62Q6ZUJ4 267 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 KIAA0319LQ8IZA0 1049 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 C10orf82Q8WW14 230 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 CPT1BQ92523 772 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 KCNN1Q92952 543 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF570Q96NI8 536 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 WDR83Q9BRX9 315 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 TEX13BQ9BXU2 312 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 TMEM134Q9H6X4 195 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 TCRBV7S3A2A0A539 114 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 ADCY3O60266 1144 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 CST8O60676 142 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 PTPRAP18433 802 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 OAZ1P54368 228 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 MAPK6Q16659 721 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 RHPN2Q8IUC4 686 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 WDR49Q8IV35 697 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 JOSD2Q8TAC2 188 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 RAB3IPQ96QF0 476 aaPredicted RBP16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 NIFKQ9BYG3 293 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 NIF3L1Q9GZT8 377 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 LRMDAQ9H2I8 198 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 RLFQ13129 1914 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 GOLGA8RI6L899 631 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 STAM2O75886 525 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 CBX6O95503 412 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 CD48P09326 243 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms