RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZNF165P49910 485 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 CYP27A1Q02318 531 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 TAF12Q16514 161 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 GBP6Q6ZN66 633 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 SEPT5Q99719 369 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-208ENST00000564703 BCO2Q9BYV7 579 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 NDST4Q9H3R1 872 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 FAM124BQ9H5Z6 455 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-208ENST00000564703 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
RAB40C-208ENST00000564703 INSL5Q9Y5Q6 135 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 MYBPHLA2RUH7 354 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 ATP2C2O75185 946 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 LRRN2O75325 713 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 CAVIN2O95810 425 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 IL9P15248 144 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 CD58P19256 250 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 ASPAP45381 313 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 CDR1P51861 262 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 NDST1P52848 882 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
RAB40C-208ENST00000564703 RPL10AP62906 217 aaKnown RBP17.04■□□□□ 0.32
RAB40C-208ENST00000564703 TWF1Q12792 350 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 VEPH1Q14D04 833 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 VWA3BQ502W6 1294 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 FAM171BQ6P995 826 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 MYCBPAPQ8TBZ2 947 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 SUSD6Q92537 303 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-208ENST00000564703 ABCB6Q9NP58 842 aa17.04■□□□□ 0.32
RAB40C-208ENST00000564703 HCRTO43612 131 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-208ENST00000564703 TPM4P67936 248 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 MDH1BQ5I0G3 518 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 CYP4A22Q5TCH4 519 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 ACOT1Q86TX2 421 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 ITIH5Q86UX2 942 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 B3GALNT2Q8NCR0 500 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 ZNF707Q96C28 371 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-208ENST00000564703 FUBP3Q96I24 572 aaKnown RBP eCLIP17.03■□□□□ 0.32
RAB40C-208ENST00000564703 CRACR2AQ9BSW2 395 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 MED10Q9BTT4 135 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 NT5C1AQ9BXI3 368 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 SDCBP2Q9H190 292 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 TMLHEQ9NVH6 421 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 PRKAG3Q9UGI9 489 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 ASB3Q9Y575 518 aa17.03■□□□□ 0.32
RAB40C-208ENST00000564703 ATP8B3O60423 1300 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
RAB40C-208ENST00000564703 POU2F2P09086 479 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CYP2F1P24903 491 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CUL2Q13617 745 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 EXOC3L4Q17RC7 722 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CDKAL1Q5VV42 579 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 GRASPQ7Z6J2 395 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CRYBG2Q8N1P7 616 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 FAM81BQ96LP2 452 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 HEXIM2Q96MH2 286 aaKnown RBP17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CORO1BQ9BR76 489 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 INTS2Q9H0H0 1204 aaKnown RBP17.02■□□□□ 0.32
RAB40C-208ENST00000564703 DPEP3Q9H4B8 488 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CRTAC1Q9NQ79 661 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 CISHQ9NSE2 258 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 GCNT4Q9P109 453 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 YIPF1Q9Y548 306 aa17.02■□□□□ 0.32
RAB40C-208ENST00000564703 TCF20Q9UGU0 1960 aaKnown RBP17.02■□□□□ 0.31
RAB40C-208ENST00000564703 ZNF197O14709 1029 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 PAPLNO95428 1278 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 ANXA13P27216 316 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 GRIK1P39086 918 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 INCA1Q0VD86 236 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 ZNF394Q53GI3 561 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 FKBP15Q5T1M5 1219 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 SCN4BQ8IWT1 228 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 ADHFE1Q8IWW8 467 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 LMO3Q8TAP4 145 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 MYLPFQ96A32 169 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 ACSF2Q96CM8 615 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-208ENST00000564703 PCED1BQ96HM7 432 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 RPGRIP1Q96KN7 1286 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 PKMYT1Q99640 499 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 FUCA2Q9BTY2 467 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 VPS16Q9H269 839 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 POMKQ9H5K3 350 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-208ENST00000564703 TAB2Q9NYJ8 693 aa17.01■□□□□ 0.31
RAB40C-208ENST00000564703 TSC2P49815 1807 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 CILPO75339 1184 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 SOAT2O75908 522 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 VNN2O95498 520 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms