RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PGLYRP2Q96PD5 576 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 CDCA3Q99618 268 aaPredicted RBP13.3□□□□□ -0.28
KARS-204ENST00000564578 SYT15Q9BQS2 421 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 XPO4Q9C0E2 1151 aaKnown RBP13.3□□□□□ -0.28
KARS-204ENST00000564578 GPR88Q9GZN0 384 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 IGFLR1Q9H665 355 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 CNTN6Q9UQ52 1028 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 FHOD1Q9Y613 1164 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 VCANP13611 3396 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 A0A1W2PQC6 194 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 C1RP00736 705 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 CPB1P15086 417 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
KARS-204ENST00000564578 RAD23BP54727 409 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 ADAM15Q13444 863 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
KARS-204ENST00000564578 TMEM184AQ6ZMB5 413 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 TTC9BQ8N6N2 239 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 EFHBQ8N7U6 833 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 SLC4A11Q8NBS3 891 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 B3GALNT2Q8NCR0 500 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 PPP2R3CQ969Q6 453 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 MTMR11A4FU01 709 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 SEC24AO95486 1093 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 GLUD1P00367 558 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 LTBRP36941 435 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 MFAP3P55082 362 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 DLX2Q07687 328 aaPredicted RBP13.29□□□□□ -0.28
KARS-204ENST00000564578 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 LLGL2Q6P1M3 1020 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 TMEM270Q6UE05 265 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 ENOSF1Q7L5Y1 443 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 PPFIBP1Q86W92 1011 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 MYCBPAPQ8TBZ2 947 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 SHC3Q92529 594 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 PCED1BQ96HM7 432 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 NT5C1AQ9BXI3 368 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 AFF4Q9UHB7 1163 aaKnown RBP13.29□□□□□ -0.28
KARS-204ENST00000564578 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
KARS-204ENST00000564578 PLXNA3P51805 1871 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
KARS-204ENST00000564578 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
KARS-204ENST00000564578 ZNF132P52740 706 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 TSPY1Q01534 308 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 DUSP4Q13115 394 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 ARHGAP44Q17R89 818 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 PAQR9Q6ZVX9 377 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 TTC39CQ8N584 583 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 KREMEN2Q8NCW0 462 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 TMEM176AQ96HP8 235 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 CLEC1BQ9P126 229 aa13.28□□□□□ -0.28
KARS-204ENST00000564578 CALCAP01258 141 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 POLR2FP61218 127 aaKnown RBP13.27□□□□□ -0.28
KARS-204ENST00000564578 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.28
KARS-204ENST00000564578 MDH1BQ5I0G3 518 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 TCEAL8Q8IYN2 117 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.28
KARS-204ENST00000564578 FAM81BQ96LP2 452 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 ZSWIM1Q9BR11 485 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 B3GNT5Q9BYG0 378 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 ACP6Q9NPH0 428 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 MAN1C1Q9NR34 630 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 TMEM30AQ9NV96 361 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 A0A0C4DFX4 3053 aa13.27□□□□□ -0.28
KARS-204ENST00000564578 TBX10O75333 385 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 RFX1P22670 979 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 SMARCB1Q12824 385 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 RAPGEF1Q13905 1077 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 NFE2Q16621 373 aaPredicted RBP13.27□□□□□ -0.29
KARS-204ENST00000564578 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 FUKQ8N0W3 1084 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 MYLPFQ96A32 169 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.29
KARS-204ENST00000564578 PCMTD1Q96MG8 357 aaPredicted RBP13.27□□□□□ -0.29
KARS-204ENST00000564578 STK33Q9BYT3 514 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 TTYH3Q9C0H2 523 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 PLEKHA4Q9H4M7 779 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 NLRC4Q9NPP4 1024 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 FAM49BQ9NUQ9 324 aa13.27□□□□□ -0.29
KARS-204ENST00000564578 ABI2Q9NYB9 513 aaPredicted RBP13.27□□□□□ -0.29
KARS-204ENST00000564578 F8VZ95 297 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 CLDN5O00501 218 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 RFPL2O75678 378 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 SOAT2O75908 522 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 CCDC130P13994 396 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 CYP2F1P24903 491 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 JAM2P57087 298 aa13.26□□□□□ -0.29
KARS-204ENST00000564578 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms