RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 SIX2Q9NPC8 291 aa18.33■□□□□ 0.52
CPNE7-207ENST00000564421 ZDHHC7Q9NXF8 308 aa18.33■□□□□ 0.52
CPNE7-207ENST00000564421 APEX2Q9UBZ4 518 aa18.33■□□□□ 0.52
CPNE7-207ENST00000564421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.33■□□□□ 0.52
CPNE7-207ENST00000564421 GABRDO14764 452 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 ZMYND10O75800 440 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 CPB1P15086 417 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 HOXA9P31269 272 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 TNNC1P63316 161 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 WDR72Q3MJ13 1102 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 ZNF667Q5HYK9 610 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 RARS2Q5T160 578 aaKnown RBP18.32■□□□□ 0.52
CPNE7-207ENST00000564421 LIN9Q5TKA1 542 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 PHLDB3Q6NSJ2 640 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 DPY19L2P1Q6NXN4 242 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 GJB7Q6PEY0 223 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 CCDC149Q6ZUS6 474 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 ADGRF2Q8IZF7 708 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 OR10T2Q8NGX3 314 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 RTP3Q9BQQ7 232 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 ACBD6Q9BR61 282 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 ZCWPW1Q9H0M4 648 aa18.32■□□□□ 0.52
CPNE7-207ENST00000564421 APOBEC3GQ9HC16 384 aaKnown RBP18.32■□□□□ 0.52
CPNE7-207ENST00000564421 UBE2TQ9NPD8 197 aaPredicted RBP18.32■□□□□ 0.52
CPNE7-207ENST00000564421 NXF1Q9UBU9 619 aaKnown RBP18.32■□□□□ 0.52
CPNE7-207ENST00000564421 AFF4Q9UHB7 1163 aaKnown RBP18.32■□□□□ 0.52
CPNE7-207ENST00000564421 TACC1O75410 805 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 NOL4O94818 638 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 C8AP07357 584 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 P4HA1P13674 534 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 IL9P15248 144 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 UCHL3P15374 230 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 WARSP23381 471 aaKnown RBP18.31■□□□□ 0.52
CPNE7-207ENST00000564421 ELF1P32519 619 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 ARPP19P56211 112 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 POLR2FP61218 127 aaKnown RBP18.31■□□□□ 0.52
CPNE7-207ENST00000564421 SMARCB1Q12824 385 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 RRAGAQ7L523 313 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 GPR149Q86SP6 731 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 ARHGEF19Q8IW93 802 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 TCEAL8Q8IYN2 117 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 C12orf76Q8N812 135 aaPredicted RBP18.31■□□□□ 0.52
CPNE7-207ENST00000564421 NECTIN4Q96NY8 510 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 MMS19Q96T76 1030 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 GANQ9H2C0 597 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 DDX43Q9NXZ2 648 aaKnown RBP18.31■□□□□ 0.52
CPNE7-207ENST00000564421 POLIQ9UNA4 740 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 USP15Q9Y4E8 981 aaPredicted RBP18.31■□□□□ 0.52
CPNE7-207ENST00000564421 FHOD1Q9Y613 1164 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 NOTCH4Q99466 2003 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 MYH10P35580 1976 aa18.31■□□□□ 0.52
CPNE7-207ENST00000564421 CCDC195A0A1B0GUA6 201 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 EPHB6O15197 1021 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 RFPL2O75678 378 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 POU2F2P09086 479 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 HNRNPA1P09651 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
CPNE7-207ENST00000564421 OR4Q2P0C623 313 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 RFX1P22670 979 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 MTHFRP42898 656 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 TRIM14Q14142 442 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 FIGNQ5HY92 759 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 PPM1LQ5SGD2 360 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 ATAT1Q5SQI0 421 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 IQCEQ6IPM2 695 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 TMC5Q6UXY8 1006 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 RNF19BQ6ZMZ0 732 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 OSTM1Q86WC4 334 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 DCP1BQ8IZD4 617 aaKnown RBP18.3■□□□□ 0.52
CPNE7-207ENST00000564421 SPC24Q8NBT2 197 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 C2orf15Q8WU43 125 aaKnown RBP18.3■□□□□ 0.52
CPNE7-207ENST00000564421 CPLX3Q8WVH0 158 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 KBTBD7Q8WVZ9 684 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 IQCDQ96DY2 449 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 FAM81BQ96LP2 452 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 RIPOR3Q96MK2 946 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 TMEM209Q96SK2 561 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 APOL5Q9BWW9 433 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 PRKD2Q9BZL6 878 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 NIF3L1Q9GZT8 377 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 HSFX1Q9UBD0 423 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 DNAJC12Q9UKB3 198 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 C5orf42Q9H799 3197 aa18.3■□□□□ 0.52
CPNE7-207ENST00000564421 DOCK8Q8NF50 2099 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 TPM1P09493 284 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 TBXAS1P24557 533 aaPredicted RBP18.29■□□□□ 0.52
CPNE7-207ENST00000564421 PCSK1P29120 753 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 MFAP3P55082 362 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 TSPY1Q01534 308 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 GCNT1Q02742 428 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 ADCY1Q08828 1119 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 CUL2Q13617 745 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 RAPGEF1Q13905 1077 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 CBX2Q14781 532 aaPredicted RBP18.29■□□□□ 0.52
CPNE7-207ENST00000564421 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 SCARA5Q6ZMJ2 495 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 SLC7A14Q8TBB6 771 aa18.29■□□□□ 0.52
CPNE7-207ENST00000564421 ZNF707Q96C28 371 aaPredicted RBP18.29■□□□□ 0.52
CPNE7-207ENST00000564421 FAXDC2Q96IV6 333 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms