RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 MAPRE1Q15691 268 aaKnown RBP18.49■□□□□ 0.55
USB1-209ENST00000564387 DCAF17Q5H9S7 520 aaPredicted RBP18.49■□□□□ 0.55
USB1-209ENST00000564387 PRSS36Q5K4E3 855 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 SPOPLQ6IQ16 392 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 RNF135Q8IUD6 432 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 MYCBPAPQ8TBZ2 947 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 KHSRPQ92945 711 aaKnown RBP eCLIP18.49■□□□□ 0.55
USB1-209ENST00000564387 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 PI4K2AQ9BTU6 479 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 IMPG2Q9BZV3 1241 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 SNX25Q9H3E2 840 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 FAM124BQ9H5Z6 455 aaPredicted RBP18.49■□□□□ 0.55
USB1-209ENST00000564387 CYP3A43Q9HB55 503 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 DACH1Q9UI36 760 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 ZFP37Q9Y6Q3 630 aaPredicted RBP18.49■□□□□ 0.55
USB1-209ENST00000564387 TRIOO75962 3097 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 P4HA2O15460 535 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 ATF6P18850 670 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 FSHRP23945 695 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 SSTR3P32745 418 aaPredicted RBP18.48■□□□□ 0.55
USB1-209ENST00000564387 MAGEA11P43364 429 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 ALDH1A3P47895 512 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 FMO5P49326 533 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 CCDC142Q17RM4 750 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 PABPC1LQ4VXU2 614 aaKnown RBP18.48■□□□□ 0.55
USB1-209ENST00000564387 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 TCERG1LQ5VWI1 586 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 UNC93AQ86WB7 457 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 CRYBG2Q8N1P7 616 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 TDRD5Q8NAT2 981 aaKnown RBP18.48■□□□□ 0.55
USB1-209ENST00000564387 LEMD2Q8NC56 503 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 OR6B3Q8NGW1 331 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 PSMG2Q969U7 264 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 ACSF2Q96CM8 615 aaPredicted RBP18.48■□□□□ 0.55
USB1-209ENST00000564387 ZNF512Q96ME7 567 aaPredicted RBP18.48■□□□□ 0.55
USB1-209ENST00000564387 MYADMQ96S97 322 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 NIF3L1Q9GZT8 377 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 MMRN2Q9H8L6 949 aa18.48■□□□□ 0.55
USB1-209ENST00000564387 PDGFRBP09619 1106 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 LAMP2P13473 410 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 PTPN1P18031 435 aaKnown RBP18.47■□□□□ 0.55
USB1-209ENST00000564387 EPHB3P54753 998 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 SLC5A9Q2M3M2 681 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 IQCEQ6IPM2 695 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 TMC8Q8IU68 726 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 ELMOD1Q8N336 334 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 LMO3Q8TAP4 145 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 DPEP3Q9H4B8 488 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 THAP9Q9H5L6 903 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 ABI2Q9NYB9 513 aaPredicted RBP18.47■□□□□ 0.55
USB1-209ENST00000564387 TMEM63CQ9P1W3 806 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 PTPRDP23468 1912 aa18.47■□□□□ 0.55
USB1-209ENST00000564387 A8MXQ7 604 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 PI4K2BG5E9Z4 385 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 MOSPD3O75425 235 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 SOAT2O75908 522 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CYP2F1P24903 491 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CCR2P41597 374 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 RAP1GAPP47736 663 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 PSMC1P62191 440 aaKnown RBP18.46■□□□□ 0.55
USB1-209ENST00000564387 MGAT5BQ3V5L5 792 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 VSTM1Q6UX27 236 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 C4orf50Q6ZRC1 276 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 DNAJB7Q7Z6W7 309 aaPredicted RBP18.46■□□□□ 0.55
USB1-209ENST00000564387 B3GALNT2Q8NCR0 500 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CCDC150Q8NCX0 1101 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 ITFG1Q8TB96 612 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 FGF13Q92913 245 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 PCED1BQ96HM7 432 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CEP295NLQ96MC4 621 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CORO1BQ9BR76 489 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 CDH7Q9ULB5 785 aa18.46■□□□□ 0.55
USB1-209ENST00000564387 ANHXE9PGG2 379 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 ZNF197O14709 1029 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 KCNH2Q12809 1159 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 POTEHQ6S545 545 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 SCARA5Q6ZMJ2 495 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 ITIH5Q86UX2 942 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 SPATA2LQ8IUW3 424 aaPredicted RBP18.45■□□□□ 0.54
USB1-209ENST00000564387 NPAS3Q8IXF0 933 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 HS6ST3Q8IZP7 471 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 TTC39CQ8N584 583 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 WHAMMQ8TF30 809 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 TATDN2Q93075 761 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 MYLPFQ96A32 169 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 TNIP3Q96KP6 325 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 SEPT5Q99719 369 aaPredicted RBP18.45■□□□□ 0.54
USB1-209ENST00000564387 MAGEC2Q9UBF1 373 aaPredicted RBP18.45■□□□□ 0.54
USB1-209ENST00000564387 LIMD1Q9UGP4 676 aa18.45■□□□□ 0.54
USB1-209ENST00000564387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.45■□□□□ 0.54
USB1-209ENST00000564387 NRG2O14511 850 aaPredicted RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 CILPO75339 1184 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 HMGA1P17096 107 aaKnown RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 SP100P23497 879 aaPredicted RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 NDST1P52848 882 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 RPL10AP62906 217 aaKnown RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 WDR44Q5JSH3 913 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 CYP4A22Q5TCH4 519 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms