RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 CMTM8Q8IZV2 173 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 TMEM86AQ8N2M4 240 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 CSGALNACT2Q8N6G5 542 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 LINC00301Q8NCQ3 95 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 ACBD6Q9BR61 282 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 PI4K2AQ9BTU6 479 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 GDAP2Q9NXN4 497 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 DDX43Q9NXZ2 648 aaKnown RBP25.68■■□□□ 1.7
NME3-206ENST00000564252 SIX4Q9UIU6 781 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 ZMYM5Q9UJ78 669 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 K7ELQ4 463 aaPredicted RBP25.67■■□□□ 1.7
NME3-206ENST00000564252 HUS1O60921 280 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 PRPF40AO75400 957 aaKnown RBP25.67■■□□□ 1.7
NME3-206ENST00000564252 CXCL12P48061 93 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 STK38Q15208 465 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 E2F4Q16254 413 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 GPD1LQ8N335 351 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 SPEM1Q8N4L4 309 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 CELF5Q8N6W0 485 aaKnown RBP25.67■■□□□ 1.7
NME3-206ENST00000564252 STKLD1Q8NE28 680 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 GLIS3Q8NEA6 775 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 NOC3LQ8WTT2 800 aaKnown RBP25.67■■□□□ 1.7
NME3-206ENST00000564252 PKMYT1Q99640 499 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 MTMR12Q9C0I1 747 aa25.67■■□□□ 1.7
NME3-206ENST00000564252 ACAT1P24752 427 aaKnown RBP25.66■■□□□ 1.7
NME3-206ENST00000564252 INTS6LQ5JSJ4 861 aaKnown RBP25.66■■□□□ 1.7
NME3-206ENST00000564252 DGKKQ5KSL6 1271 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 Q6ZS52 159 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 OSTM1Q86WC4 334 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 HPS3Q969F9 1004 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 BACH2Q9BYV9 841 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 TNMDQ9H2S6 317 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 KBTBD4Q9NVX7 518 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 SNX9Q9Y5X1 595 aa25.66■■□□□ 1.7
NME3-206ENST00000564252 KIAA0391O15091 583 aaKnown RBP25.65■■□□□ 1.7
NME3-206ENST00000564252 KRT19P08727 400 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 CSH1P0DML2 217 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 CSH2P0DML3 217 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 DDX6P26196 483 aaKnown RBP eCLIP25.65■■□□□ 1.7
NME3-206ENST00000564252 RBP5P82980 135 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 MYL7Q01449 175 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 CCINQ13939 588 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 PON2Q15165 354 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 SDHAF4Q5VUM1 108 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 LMBRD2Q68DH5 695 aaPredicted RBP25.65■■□□□ 1.7
NME3-206ENST00000564252 TOP6BLQ8N6T0 577 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 MAB21L3Q8N8X9 362 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 SPATA18Q8TC71 538 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 SECISBP2LQ93073 1101 aaKnown RBP25.65■■□□□ 1.7
NME3-206ENST00000564252 ABCB6Q9NP58 842 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 THG1LQ9NWX6 298 aaKnown RBP25.65■■□□□ 1.7
NME3-206ENST00000564252 DLL3Q9NYJ7 618 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 CCL26Q9Y258 94 aa25.65■■□□□ 1.7
NME3-206ENST00000564252 PTPRJQ12913 1337 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 GABRDO14764 452 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 SPTLC2O15270 562 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 PPP6R2O75170 966 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 PAPSS2O95340 614 aaPredicted RBP25.64■■□□□ 1.7
NME3-206ENST00000564252 TMEM191BP0C7N4 346 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 CYP2F1P24903 491 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 HOXD13P35453 343 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 AVPR1AP37288 418 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 PUM1Q14671 1186 aaKnown RBP eCLIP25.64■■□□□ 1.7
NME3-206ENST00000564252 DDR2Q16832 855 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 CCDC142Q17RM4 750 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 ITPRIPL2Q3MIP1 535 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 ADGRF2Q8IZF7 708 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 GPR161Q8N6U8 529 aaKnown RBP25.64■■□□□ 1.7
NME3-206ENST00000564252 USP13Q92995 863 aaPredicted RBP25.64■■□□□ 1.7
NME3-206ENST00000564252 FAM83CQ9BQN1 747 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 TRIM9Q9C026 710 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 INTS13Q9NVM9 706 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 GTF3C4Q9UKN8 822 aa25.64■■□□□ 1.7
NME3-206ENST00000564252 MAGED2Q9UNF1 606 aaPredicted RBP25.64■■□□□ 1.7
NME3-206ENST00000564252 K7ESF4 209 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 HCRTO43612 131 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 TADA3O75528 432 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 DMWDQ09019 674 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 SOWAHAQ2M3V2 549 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 TXNDC8Q6A555 127 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 STXBP4Q6ZWJ1 553 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 DGLUCYQ7Z3D6 616 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 OR5B17Q8NGF7 314 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 ANKRD36BP1Q96IX9 119 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 LRRC27Q9C0I9 530 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 CUEDC2Q9H467 287 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 GKN1Q9NS71 199 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 C2orf42Q9NWW7 574 aa25.63■■□□□ 1.69
NME3-206ENST00000564252 TFIP11Q9UBB9 837 aaKnown RBP25.63■■□□□ 1.69
NME3-206ENST00000564252 ZNF638Q14966 1978 aaKnown RBP25.62■■□□□ 1.69
NME3-206ENST00000564252 SOBPA7XYQ1 873 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 NOL4O94818 638 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 TGM1P22735 817 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 LHX1P48742 406 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 RPL10AP62906 217 aaKnown RBP25.62■■□□□ 1.69
NME3-206ENST00000564252 LIMS2Q7Z4I7 341 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 MON1AQ86VX9 555 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 CBWD2Q8IUF1 395 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 RIN3Q8TB24 985 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 MRPS31Q92665 395 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms