RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ADGRF2Q8IZF7 708 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 OR6B3Q8NGW1 331 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 SPATA18Q8TC71 538 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 VN1R3Q9BXE9 311 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 CD207Q9UJ71 328 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 PCDHB8Q9UN66 801 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 BZW2Q9Y6E2 419 aaKnown RBP18.07■□□□□ 0.48
CMTM3-208ENST00000564247 SF3B1O75533 1304 aaKnown RBP eCLIP18.06■□□□□ 0.48
CMTM3-208ENST00000564247 CXCL14O95715 111 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 TYMPP19971 482 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 WARSP23381 471 aaKnown RBP18.06■□□□□ 0.48
CMTM3-208ENST00000564247 IGFBP6P24592 240 aaPredicted RBP18.06■□□□□ 0.48
CMTM3-208ENST00000564247 LHX1P48742 406 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 PTK2Q05397 1052 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 SMAD4Q13485 552 aaKnown RBP18.06■□□□□ 0.48
CMTM3-208ENST00000564247 LIMS2Q7Z4I7 341 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 UNC93AQ86WB7 457 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 THEM5Q8N1Q8 247 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 PDCL2Q8N4E4 241 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 VN1R2Q8NFZ6 395 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 MRPL45Q9BRJ2 306 aaKnown RBP18.06■□□□□ 0.48
CMTM3-208ENST00000564247 GPR88Q9GZN0 384 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 SDCBP2Q9H190 292 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 MARCH5Q9NX47 278 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 CNTN6Q9UQ52 1028 aa18.06■□□□□ 0.48
CMTM3-208ENST00000564247 A8MXQ7 604 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 I3L4J1 428 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 SYN3O14994 580 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 CYP26A1O43174 497 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 MBTPS2O43462 519 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 CYP11A1P05108 521 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 SERPING1P05155 500 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 SRGAP2BP0DMP2 458 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 HNRNPH3P31942 346 aaKnown RBP18.05■□□□□ 0.48
CMTM3-208ENST00000564247 KLHL30Q0D2K2 578 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 INCA1Q0VD86 236 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 CLUL1Q15846 466 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 FAM171A1Q5VUB5 890 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 WSCD1Q658N2 575 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 FUT10Q6P4F1 479 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 LRRC8AQ8IWT6 810 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 UBR7Q8N806 425 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 RBBP8NLQ8NC74 664 aaPredicted RBP18.05■□□□□ 0.48
CMTM3-208ENST00000564247 CCDC112Q8NEF3 446 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 KIAA1257Q9ULG3 409 aa18.05■□□□□ 0.48
CMTM3-208ENST00000564247 F8W810 466 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 CILPO75339 1184 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 EFEMP2O95967 443 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 PNMA6AP0CW24 399 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-208ENST00000564247 NDST1P52848 882 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 RBM10P98175 930 aaKnown RBP18.04■□□□□ 0.48
CMTM3-208ENST00000564247 SMAD2Q15796 467 aaKnown RBP18.04■□□□□ 0.48
CMTM3-208ENST00000564247 ZNF394Q53GI3 561 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 CYP26C1Q6V0L0 522 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 IRF2BP2Q7Z5L9 587 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 TMTC1Q8IUR5 882 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 RNF168Q8IYW5 571 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-208ENST00000564247 SMRP1Q8NCR6 262 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 TMEM176AQ96HP8 235 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-208ENST00000564247 PRKAG3Q9UGI9 489 aa18.04■□□□□ 0.48
CMTM3-208ENST00000564247 TIMM13Q9Y5L4 95 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-208ENST00000564247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 CLASP2O75122 1294 aaKnown RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 SOD2P04179 222 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 PAEPP09466 180 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 PDGFRBP09619 1106 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 PCSK1P29120 753 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 CA8P35219 290 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 CLCN1P35523 988 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 CDK17Q00537 523 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 YWHAHQ04917 246 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 PTPN14Q15678 1187 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 USP41Q3LFD5 358 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 TDRD12Q587J7 1177 aaKnown RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 OVOS1Q6IE37 1185 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 KBTBD7Q8WVZ9 684 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 AUTS2Q8WXX7 1259 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 TNIP3Q96KP6 325 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 HEXIM2Q96MH2 286 aaKnown RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 GPR62Q9BZJ7 368 aa18.03■□□□□ 0.48
CMTM3-208ENST00000564247 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
CMTM3-208ENST00000564247 H7C4K7 107 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 GABRDO14764 452 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 LILRB3O75022 631 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 SKILP12757 684 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 FGFR3P22607 806 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 GNA15P30679 374 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 PRKCIP41743 596 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 PDE6CP51160 858 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 ZNF132P52740 706 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 RAD23BP54727 409 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 MEA1Q16626 185 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 KIAA1841Q6NSI8 718 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 CASP10Q92851 521 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms