RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MTF2Q9Y483 593 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 B3GALT1Q9Y5Z6 326 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MED1Q15648 1581 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SPATA31A1Q5TZJ5 1347 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SPATA31A5Q5VU36 1347 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SPATA31A7Q8IWB4 1347 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 PCDH11XQ9BZA7 1347 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 PCDH11YQ9BZA8 1340 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 COL16A1Q07092 1604 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 LOC100289279A0A1B0GTE1 492 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 H3BNC9 293 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 NKRFO15226 690 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 IPO8O15397 1037 aaKnown RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 PRAMEF1O95521 474 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 GUCA1CO95843 209 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ACADMP11310 421 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ITGB7P26010 798 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ATP5DP30049 168 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TPD52P55327 224 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 EVCP57679 992 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MALLQ13021 153 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TARBP2Q15633 366 aaKnown RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 CHRNA2Q15822 529 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 VWA3BQ502W6 1294 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 GPR139Q6DWJ6 353 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 NAA16Q6N069 864 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TIGD7Q6NT04 549 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 NFRKBQ6P4R8 1299 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 KLHL17Q6TDP4 642 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 DENND5BQ6ZUT9 1274 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 NUP54Q7Z3B4 507 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ZFPM1Q8IX07 1006 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 CYP2W1Q8TAV3 490 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 UTP15Q8TED0 518 aaKnown RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 DLG3Q92796 817 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 HDAC10Q969S8 669 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 RNF125Q96EQ8 232 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ZNF845Q96IR2 970 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SNX22Q96L94 193 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 FBXL18Q96ME1 805 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 C7orf25Q9BPX7 421 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 YIPF2Q9BWQ6 316 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 FOXQ1Q9C009 403 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 USP44Q9H0E7 712 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ADAM7Q9H2U9 754 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 KCNF1Q9H3M0 494 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 RNPEPQ9H4A4 650 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MKNK2Q9HBH9 465 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 CHST7Q9NS84 486 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 LMBRD1Q9NUN5 540 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 CRIM1Q9NZV1 1036 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 USP36Q9P275 1121 aaKnown RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 PCDHA6Q9UN73 950 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 CYP46A1Q9Y6A2 500 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 IKBKGQ9Y6K9 419 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 COL22A1Q8NFW1 1626 aaPredicted RBP5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 CDK12Q9NYV4 1490 aaPredicted RBP5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 IRS2Q9Y4H2 1338 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 OVOS2A0A0G2JMS6 1433 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 OVOS2A0A0J9YW53 1432 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 OVOS2Q6IE36 1432 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 CCDC196A0A1B0GTZ2 297 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 AGAP14A8MT82 685 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 GOLGA6L22H0YM25 854 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 AKR1B10O60218 316 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 SRGAP2O75044 1071 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 TUBB4AP04350 444 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 CSH1P0DML2 217 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 CSH2P0DML3 217 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 BMP3P12645 472 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 SCG2P13521 617 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 HDCP19113 662 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 PPP2R1AP30153 589 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 LIMK1P53667 647 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 ADAM15Q13444 863 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 KCNB1Q14721 858 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 MYBPC3Q14896 1274 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 RRS1Q15050 365 aaKnown RBP5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 FYB2Q5VWT5 728 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 ABRAXAS1Q6UWZ7 409 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 UNQ6494/PRO21346Q6UXR6 183 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 ESPNLQ6ZVH7 1005 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 USP49Q70CQ1 688 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 BEND5Q7L4P6 421 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 TMC6Q7Z403 805 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 SZRD1Q7Z422 152 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 HEATR3Q7Z4Q2 680 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 TTC7BQ86TV6 843 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 SLC9B2Q86UD5 537 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 CLEC10AQ8IUN9 316 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 EGFL6Q8IUX8 553 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 USHBP1Q8N6Y0 703 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 TRIML1Q8N9V2 468 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 MOSPD2Q8NHP6 518 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
VPS35P1-201ENST00000563400 SCAMP5Q8TAC9 235 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms