RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 NLRP12P59046 1061 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 BIRC3Q13489 604 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 CBX2Q14781 532 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 PTPRNQ16849 979 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 WDR72Q3MJ13 1102 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 CT47A1Q5JQC4 288 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 KRT39Q6A163 491 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TMC5Q6UXY8 1006 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 FRMD5Q7Z6J6 570 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 LRRTM3Q86VH5 581 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 OSTM1Q86WC4 334 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TAF4BQ92750 862 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 SYAP1Q96A49 352 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TMEM209Q96SK2 561 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 PKMYT1Q99640 499 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ACBD6Q9BR61 282 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ZCWPW1Q9H0M4 648 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 METTL14Q9HCE5 456 aaKnown RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TMEM8AQ9HCN3 771 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TMEM63CQ9P1W3 806 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 HSFX1Q9UBD0 423 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 PRKAG3Q9UGI9 489 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ARMCX3Q9UH62 379 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 CDH22Q9UJ99 828 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 COQ4Q9Y3A0 265 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 C5orf42Q9H799 3197 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC195A0A1B0GUA6 201 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 PMM2O15305 246 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 TACC1O75410 805 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 SEC24AO95486 1093 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 C8AP07357 584 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 HNRNPA1P09651 372 aaKnown RBP eCLIP6.63□□□□□ -1.35
CNOT1-204ENST00000563130 OR4Q2P0C623 313 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-204ENST00000563130 LHX1P48742 406 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 RPIAP49247 311 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 TRPC3Q13507 836 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 SGSM1Q2NKQ1 1148 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 RARS2Q5T160 578 aaKnown RBP6.63□□□□□ -1.35
CNOT1-204ENST00000563130 CES5AQ6NT32 575 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 METTL23Q86XA0 190 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 ADGRF2Q8IZF7 708 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 TAS1R2Q8TE23 839 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 NECTIN4Q96NY8 510 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 APOL5Q9BWW9 433 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
CNOT1-204ENST00000563130 CRISPLD1Q9H336 500 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 FAM50BQ9Y247 325 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 R3HCC1Q9Y3T6 440 aaKnown RBP6.63□□□□□ -1.35
CNOT1-204ENST00000563130 NME7Q9Y5B8 376 aa6.63□□□□□ -1.35
CNOT1-204ENST00000563130 MTMR11A4FU01 709 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ZBTB24O43167 697 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 PHACTR2O75167 634 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 LRRN2O75325 713 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 GNA14O95837 355 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 HLA-DRAP01903 254 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CCNYL3P0C7X3 344 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CPB1P15086 417 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 WARSP23381 471 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 LMO2P25791 158 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 MTHFRP42898 656 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 MXI1P50539 228 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ARPP19P56211 112 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ZP2Q05996 745 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ADCY1Q08828 1119 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 SMARCB1Q12824 385 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ZNF699Q32M78 642 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CBWD6Q4V339 395 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ZNF667Q5HYK9 610 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CBWD3Q5JTY5 395 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CBWD5Q5RIA9 395 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ATAT1Q5SQI0 421 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC183Q5T5S1 534 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 LIN9Q5TKA1 542 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 LYPD8Q6UX82 237 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC149Q6ZUS6 474 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 IRF2BP1Q8IU81 584 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 TRIM59Q8IWR1 403 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 THEM5Q8N1Q8 247 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 SLC7A14Q8TBB6 771 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ADAMTS19Q8TE59 1207 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 TSC1Q92574 1164 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 RIPOR3Q96MK2 946 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 PHF7Q9BWX1 381 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 POMKQ9H5K3 350 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 DDX43Q9NXZ2 648 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 HCRTO43612 131 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 STX10O60499 249 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 WEE2P0C1S8 567 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ASPAP45381 313 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 TNNC1P63316 161 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 KLHL40Q2TBA0 621 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 INTS6LQ5JSJ4 861 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 PLA2G2CQ5R387 149 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 PPM1LQ5SGD2 360 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 FAM171BQ6P995 826 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ADHFE1Q8IWW8 467 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ATAD1Q8NBU5 361 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 FBXL13Q8NEE6 735 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms