RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 HMGA1P17096 107 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 KCNA4P22459 653 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 MPLP40238 635 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 RPL10AP62906 217 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 POSTNQ15063 836 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 N4BP2L1Q5TBK1 243 aaPredicted RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 SLC39A4Q6P5W5 647 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 SYT13Q7L8C5 426 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 TMEM150AQ86TG1 271 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 CPA6Q8N4T0 437 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 ACDQ96AP0 544 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 HVCN1Q96D96 273 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 TRMT2BQ96GJ1 504 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 P2RY13Q9BPV8 354 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 SMG9Q9H0W8 520 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 EBF1Q9UH73 591 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 RNF40O75150 1001 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 LONP1P36776 959 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 ACOT2P49753 483 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 FAM160A1Q05DH4 1040 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 LRRTM3Q86VH5 581 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 SPATA18Q8TC71 538 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 TMEM206Q9H813 350 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 CCL26Q9Y258 94 aa16.97■□□□□ 0.31
HERPUD1-205ENST00000562914 H3BQV1 296 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 APBB3O95704 486 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 PXNP49023 591 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 NR1H3Q13133 447 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 PLK5Q496M5 336 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 KRI1Q8N9T8 703 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 RAD54LQ92698 747 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 CHFRQ96EP1 664 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 MYRFLQ96LU7 910 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 ACBD6Q9BR61 282 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 BLOC1S4Q9NUP1 217 aa16.96■□□□□ 0.31
HERPUD1-205ENST00000562914 MAP1BP46821 2468 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 ZFHX4Q86UP3 3567 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 OTOL1A6NHN0 477 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 ANKRD63C9JTQ0 380 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 KCNK5O95279 499 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 EGFP01133 1207 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 NMT1P30419 496 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 GJA4P35212 333 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 GALK1P51570 392 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 MTF1Q14872 753 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 RNF43Q68DV7 783 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 TXNDC8Q6A555 127 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 TRIM68Q6AZZ1 485 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 FSIP1Q8NA03 581 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 OSCP1Q8WVF1 389 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 POMGNT1Q8WZA1 660 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 CD101Q93033 1021 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 KIF2CQ99661 725 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 ECT2Q9H8V3 914 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 SEL1LQ9UBV2 794 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 MAGED2Q9UNF1 606 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 EXOC7Q9UPT5 735 aa16.95■□□□□ 0.3
HERPUD1-205ENST00000562914 SPAG17Q6Q759 2223 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 CHD8Q9HCK8 2581 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 HUS1O60921 280 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 NOL4O94818 638 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 LDHAP00338 332 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 TCF3P15923 654 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 PLCG1P19174 1290 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 DDIT3P35638 169 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 PDE6CP51160 858 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 MYL7Q01449 175 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 MCM6Q14566 821 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 CCDC6Q16204 474 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 CFAP221Q4G0U5 840 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 LRRC52Q8N7C0 313 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 CACTINQ8WUQ7 758 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 FUBP3Q96I24 572 aaKnown RBP eCLIP16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 PI4K2AQ9BTU6 479 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 DUSP15Q9H1R2 295 aaPredicted RBP16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 RXFP3Q9NSD7 469 aa16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 DUS2Q9NX74 493 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-205ENST00000562914 SCN1AP35498 2009 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 TRAV19A0A0A6YYK7 116 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 ARSAP15289 507 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 PFKLP17858 780 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 HOXC13P31276 330 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 IFNAR2P48551 515 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms