RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PDHA1P08559 390 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 GNAI3P08754 354 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 MYBL2P10244 700 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 EEFSECP57772 596 aaKnown RBP4.07□□□□□ -1.76
DENND4A-205ENST00000562540 GNAI1P63096 354 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 BRDTQ58F21 947 aaPredicted RBP4.07□□□□□ -1.76
DENND4A-205ENST00000562540 PDSS2Q86YH6 399 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 ZDHHC17Q8IUH5 632 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 GALNT16Q8N428 558 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 PNLDC1Q8NA58 520 aaKnown RBP4.07□□□□□ -1.76
DENND4A-205ENST00000562540 CAMKK2Q96RR4 588 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 CNPPD1Q9BV87 410 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 EBF3Q9H4W6 596 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 BRD9Q9H8M2 597 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 PDGFCQ9NRA1 345 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 TYW1Q9NV66 732 aaKnown RBP4.07□□□□□ -1.76
DENND4A-205ENST00000562540 TUBD1Q9UJT1 453 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 CYP2D7A0A087X1C5 515 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 SHTN1A0MZ66 631 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 GABRDO14764 452 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 ADAMTS3O15072 1205 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 VPS4BO75351 444 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 GJB1P08034 283 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 CYP2C18P33260 490 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 ZNF135P52742 658 aaPredicted RBP4.06□□□□□ -1.76
DENND4A-205ENST00000562540 IL10RAQ13651 578 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 LRRC41Q15345 812 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 PCID2Q5JVF3 399 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 VPS53Q5VIR6 699 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 PPP4R3AQ6IN85 833 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 PGM2L1Q6PCE3 622 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 NAPRTQ6XQN6 538 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 WDR53Q7Z5U6 358 aaPredicted RBP4.06□□□□□ -1.76
DENND4A-205ENST00000562540 FAM109AQ8N4B1 249 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 PRSS3P2Q8NHM4 247 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 ADAMTS15Q8TE58 950 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 C5orf34Q96MH7 638 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 TMEM79Q9BSE2 394 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 ASPSCR1Q9BZE9 553 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 CCDC8Q9H0W5 538 aaPredicted RBP4.06□□□□□ -1.76
DENND4A-205ENST00000562540 SERHLQ9NQF3 203 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 MAN1C1Q9NR34 630 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 MRPS18AQ9NVS2 196 aaKnown RBP4.06□□□□□ -1.76
DENND4A-205ENST00000562540 RLIMQ9NVW2 624 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 TRNAU1APQ9NX07 287 aaKnown RBP4.06□□□□□ -1.76
DENND4A-205ENST00000562540 MKS1Q9NXB0 559 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 DDX56Q9NY93 547 aaKnown RBP4.06□□□□□ -1.76
DENND4A-205ENST00000562540 CFAP97Q9P2B7 532 aa4.06□□□□□ -1.76
DENND4A-205ENST00000562540 WASHC2CQ9Y4E1 1318 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 TRIM75PA6NK02 468 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 F2RL2O00254 374 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 PPM1DO15297 605 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 XPOTO43592 962 aaKnown RBP4.05□□□□□ -1.76
DENND4A-205ENST00000562540 CLCN2P51788 898 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 HABP2Q14520 560 aaPredicted RBP4.05□□□□□ -1.76
DENND4A-205ENST00000562540 TRIP6Q15654 476 aaKnown RBP4.05□□□□□ -1.76
DENND4A-205ENST00000562540 PTPN21Q16825 1174 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 C3orf36Q3SXR2 165 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 MIS18BP1Q6P0N0 1132 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 CHSY1Q86X52 802 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 CBARPQ8N350 705 aaPredicted RBP4.05□□□□□ -1.76
DENND4A-205ENST00000562540 NANOGP1Q8N7R0 232 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 C1orf162Q8NEQ5 155 aaPredicted RBP4.05□□□□□ -1.76
DENND4A-205ENST00000562540 KAT5Q92993 513 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 ASB2Q96Q27 587 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 SLAMF7Q9NQ25 335 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 GNL3LQ9NVN8 582 aaKnown RBP4.05□□□□□ -1.76
DENND4A-205ENST00000562540 MTMR4Q9NYA4 1195 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 DLL3Q9NYJ7 618 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 AFG3L2Q9Y4W6 797 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 LRP12Q9Y561 859 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 IPPQ9Y573 584 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 MRFAP1Q9Y605 127 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 RAD54BQ9Y620 910 aa4.05□□□□□ -1.76
DENND4A-205ENST00000562540 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 CCDC187A0A096LP49 1063 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 SOCS2O14508 198 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 HTRA2O43464 458 aaPredicted RBP4.04□□□□□ -1.76
DENND4A-205ENST00000562540 TLR5O60602 858 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 PDGFRBP09619 1106 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 ENGP17813 658 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 C5AR1P21730 350 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 CYP2C19P33261 490 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 ZNF134P52741 427 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 CYP4F2P78329 520 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 HOXA4Q00056 320 aaPredicted RBP4.04□□□□□ -1.76
DENND4A-205ENST00000562540 DAZAP2Q15038 168 aaPredicted RBP4.04□□□□□ -1.76
DENND4A-205ENST00000562540 ACAP2Q15057 778 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 Q4G0T1 1027 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 SLC4A10Q6U841 1118 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 MAVSQ7Z434 540 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 ZBTB46Q86UZ6 589 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 PNMA8AQ86V59 439 aaPredicted RBP4.04□□□□□ -1.76
DENND4A-205ENST00000562540 C8orf58Q8NAV2 365 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 JADE3Q92613 823 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
DENND4A-205ENST00000562540 SIK2Q9H0K1 926 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms