RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PI4K2AQ9BTU6 479 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 RBAKQ9NYW8 714 aaPredicted RBP17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 IDEP14735 1019 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GARTP22102 1010 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TXLNAP40222 546 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CCDC142Q17RM4 750 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ITPRIPL2Q3MIP1 535 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SDHAF4Q5VUM1 108 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 RIN3Q8TB24 985 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LEO1Q8WVC0 666 aaPredicted RBP17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 USP13Q92995 863 aaPredicted RBP17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PKMYT1Q99640 499 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 FAM83CQ9BQN1 747 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PANK2Q9BZ23 570 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 HPS4Q9NQG7 708 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 THG1LQ9NWX6 298 aaKnown RBP17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 DDX43Q9NXZ2 648 aaKnown RBP17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 RAB23Q9ULC3 237 aa17.97■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GOLGA8IPA6NC78 632 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 OTOL1A6NHN0 477 aaPredicted RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GOLGA8JA6NMD2 632 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PRR5-ARHGAP8B1AHC4 643 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PRPF40AO75400 957 aaKnown RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TADA3O75528 432 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ACAT1P24752 427 aaKnown RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 AVPR1AP37288 418 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ARHGAP8P85298 464 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TSPY1Q01534 308 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SIM2Q14190 667 aaPredicted RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 NFE2Q16621 373 aaPredicted RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 INTS6LQ5JSJ4 861 aaKnown RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TXNDC8Q6A555 127 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 HEATR6Q6AI08 1181 aaKnown RBP17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TRIM68Q6AZZ1 485 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LONP2Q86WA8 852 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 OSTM1Q86WC4 334 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LRRC52Q8N7C0 313 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 USP28Q96RU2 1077 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ACBD6Q9BR61 282 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PCIF1Q9H4Z3 704 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GKN1Q9NS71 199 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SIX4Q9UIU6 781 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ZMYM5Q9UJ78 669 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 HCRTO43612 131 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 EXTL3O43909 919 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 HUS1O60921 280 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LDHAP00338 332 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 RETP07949 1114 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SDHBP21912 280 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CYP2F1P24903 491 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 DDX6P26196 483 aaKnown RBP eCLIP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 STAT6P42226 847 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 BFSP1Q12934 665 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ALCAMQ13740 583 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 RUNX3Q13761 415 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 DDR2Q16832 855 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PKN3Q6P5Z2 889 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SYCP3Q8IZU3 236 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SYNPOQ8N3V7 929 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CSGALNACT2Q8N6G5 542 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CACTINQ8WUQ7 758 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MTMR12Q9C0I1 747 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 EBF3Q9H4W6 596 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TDP1Q9NUW8 608 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PANK4Q9NVE7 773 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 GDAP2Q9NXN4 497 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ITGA11Q9UKX5 1188 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CDV3Q9UKY7 258 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MAGED2Q9UNF1 606 aaPredicted RBP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MORC2Q9Y6X9 1032 aaPredicted RBP17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PTPRJQ12913 1337 aa17.95■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PRPF6O94906 941 aaKnown RBP17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CSH1P0DML2 217 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CSH2P0DML3 217 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CNR2P34972 360 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SLC39A14Q15043 492 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TMEM196Q5HYL7 178 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MON1AQ86VX9 555 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TMEM86AQ8N2M4 240 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 GLIS3Q8NEA6 775 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 NOC3LQ8WTT2 800 aaKnown RBP17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 KIF9Q9HAQ2 790 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ABCB6Q9NP58 842 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MTMR6Q9Y217 621 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SNX9Q9Y5X1 595 aa17.94■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 GABRDO14764 452 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 NOL4O94818 638 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 KRT19P08727 400 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ARSAP15289 507 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 HOXA6P31267 233 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MYL7Q01449 175 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SOWAHAQ2M3V2 549 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LMBRD2Q68DH5 695 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms