RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 GDE1Q9NZC3 331 aa10.16□□□□□ -0.78
NSMCE1-203ENST00000562039 USP25Q9UHP3 1055 aa10.16□□□□□ -0.78
NSMCE1-203ENST00000562039 CACNA1HO95180 2353 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 FAM237AA0A1B0GTK4 181 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 A0A1W2PQ27 194 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 A0A1W2PQ64 194 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 A0A1W2PQD8 194 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 GOLGA6L4A6NEF3 574 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 ECI2O75521 394 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 PAX3P23760 479 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SOX9P48436 509 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 TUFMP49411 452 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 CLCN5P51795 746 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 EPHA5P54756 1037 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 CDH8P55286 799 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 CYP27A1Q02318 531 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 PSMD2Q13200 908 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 MLF2Q15773 248 aaPredicted RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 WDR72Q3MJ13 1102 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 MDH1BQ5I0G3 518 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 TDRD10Q5VZ19 366 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SPOPLQ6IQ16 392 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 ITIH5Q86UX2 942 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 ARID3BQ8IVW6 561 aaPredicted RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 TOP6BLQ8N6T0 577 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 DTWD2Q8NBA8 298 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SPPL2BQ8TCT7 592 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SMARCD2Q92925 531 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 ELSPBP1Q96BH3 223 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 LRRC3BQ96PB8 259 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 TRMT61BQ9BVS5 477 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SNX25Q9H3E2 840 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SMYD3Q9H7B4 428 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 CRTAC1Q9NQ79 661 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SLC2A4RGQ9NR83 387 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 GDAP2Q9NXN4 497 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 MAFFQ9ULX9 164 aa10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 NDRG2Q9UN36 371 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-203ENST00000562039 SLC38A8A6NNN8 435 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 CLDN5O00501 218 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 DPYSL4O14531 572 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 GABRDO14764 452 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 PRAMEF12O95522 483 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 TRIM49P0CI25 452 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 TRIM49CP0CI26 452 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 GLULP15104 373 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 BDNFP23560 247 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 LHX1P48742 406 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 MRE11P49959 708 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 TNNC1P63316 161 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 NUCB2P80303 420 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 IFRD2Q12894 506 aaPredicted RBP10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 TXNDC8Q6A555 127 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 C12orf56Q8IXR9 622 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 YAF2Q8IY57 180 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 CCDC105Q8IYK2 499 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 TMEM86AQ8N2M4 240 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 MAB21L3Q8N8X9 362 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 PARD3BQ8TEW8 1205 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 PKMYT1Q99640 499 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 ACBD6Q9BR61 282 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 SLC46A2Q9BY10 475 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 SDCBP2Q9H190 292 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 TRPC7Q9HCX4 862 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 DMAC2Q9NW81 257 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 SIT1Q9Y3P8 196 aa10.14□□□□□ -0.79
NSMCE1-203ENST00000562039 FAM170BA6NMN3 283 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 A8MXQ7 604 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 PDXKO00764 312 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 ZNF263O14978 683 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 CALUO43852 315 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 GADD45BO75293 160 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 RHOBTB3O94955 611 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 VNN1O95497 513 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 C4BPAP04003 597 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 HMGA1P17096 107 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 PSMC3P17980 439 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 WARSP23381 471 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 TARSP26639 723 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 PCSK1P29120 753 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 GNL1P36915 607 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 GRIK1P39086 918 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 CACNA2D1P54289 1103 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 NLRP12P59046 1061 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 SNRPFP62306 86 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 NCOA4Q13772 614 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 ANGPT1Q15389 498 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 NFE2Q16621 373 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 ZNF699Q32M78 642 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 ARHGAP15Q53QZ3 475 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 TMEM150AQ86TG1 271 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 FMR1NBQ8N0W7 255 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 LEMD2Q8NC56 503 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 GOLGA5Q8TBA6 731 aa10.13□□□□□ -0.79
NSMCE1-203ENST00000562039 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms