RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TMEM191CA6NGB0 347 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SPDYE5A6NIY4 337 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 VNN1O95497 513 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ITGAVP06756 1048 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 TMEM191BP0C7N4 346 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 PSMC4P43686 418 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 TUBP50607 506 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 RPS6P62753 249 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SARNPP82979 210 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 CCDC142Q17RM4 750 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 DNAJC24Q6P3W2 148 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 PCGF5Q86SE9 256 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 NSL1Q96IY1 281 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 KANSL3Q9P2N6 904 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 NFASCO94856 1347 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 PTPRJQ12913 1337 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ZBED4O75132 1171 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 KPNB1Q14974 876 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 KLHL38Q2WGJ6 581 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 BBS9Q3SYG4 887 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 CMPK2Q5EBM0 449 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SLC27A3Q5K4L6 730 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 FNBP1LQ5T0N5 605 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SNX30Q5VWJ9 437 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 FBXO36Q8NEA4 188 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SYT15Q9BQS2 421 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 TUBB6Q9BUF5 446 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 DLGAP2Q9P1A6 1054 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 AGO2Q9UKV8 859 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 PCDHA10Q9Y5I2 948 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 TM9SF1O15321 606 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 GSC2O15499 205 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 KRT36O76013 467 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SERPINB3P29508 390 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 MSS51Q4VC12 460 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ANKRD22Q5VYY1 191 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 CCDC62Q6P9F0 684 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ADGRD1Q6QNK2 874 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 PPIL6Q8IXY8 311 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 NLGN1Q8N2Q7 840 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF606Q8WXB4 792 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 STMN2Q93045 179 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 NKD2Q969F2 451 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF333Q96JL9 665 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SH3GL3Q99963 347 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 FBXO6Q9NRD1 293 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 METTL5Q9NRN9 209 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 GINM1Q9NU53 330 aa14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 SEPT9Q9UHD8 586 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-202ENST00000561976 ABLIM1O14639 778 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 LPXNO60711 386 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 MT-ND3P03897 115 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ESRRAP11474 423 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 MMP8P22894 467 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF252P-AS1Q0IIN9 211 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ARHGEF16Q5VV41 709 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 TAS1R3Q7RTX0 852 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 CDAN1Q8IWY9 1227 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 DTX3LQ8TDB6 740 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 FAM151AQ8WW52 585 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 PTPRN2Q92932 1015 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF341Q9BYN7 854 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 POLR3FQ9H1D9 316 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 VPS11Q9H270 941 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 VCXQ9H320 206 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 RBAKQ9NYW8 714 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 CTDP1Q9Y5B0 961 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 CAPN9O14815 690 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF862O60290 1169 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 CDKN2BP42772 138 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 RCN2Q14257 317 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ZRSR2Q15696 482 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 LRRC38Q5VT99 294 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 BANPQ8N9N5 519 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 MCPH1Q8NEM0 835 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 RSAD2Q8WXG1 361 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 TTC17Q96AE7 1141 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ALKBH8Q96BT7 664 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 TMEM120AQ9BXJ8 343 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 ACSS3Q9H6R3 686 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 NUB1Q9Y5A7 615 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 IKBKGQ9Y6K9 419 aa14.67□□□□□ -0.06
VPS9D1-202ENST00000561976 CALB1P05937 261 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 SKIP12755 728 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 TBXAS1P24557 533 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 OTUD4Q01804 1114 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 OGDHQ02218 1023 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ENPEPQ07075 957 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 LBRQ14739 615 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ACSBG2Q5FVE4 666 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 SWSAP1Q6NVH7 229 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ACTL9Q8TC94 416 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 TEKT4Q8WW24 435 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 SCG3Q8WXD2 468 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 CPT1BQ92523 772 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ATP6V0A1Q93050 837 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 PTCD3Q96EY7 689 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms