RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TUT1Q9H6E5 874 aaKnown RBP19.54■□□□□ 0.72
RAB40C-206ENST00000561781 COQ6Q9Y2Z9 468 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 SMCO2A6NFE2 343 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 TXNDC9O14530 226 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 CHRNB2P17787 502 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 RXRGP48443 463 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 IRX4P78413 519 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 CDK16Q00536 496 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 CAV1Q03135 178 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 TGFBIQ15582 683 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 ZNF410Q86VK4 478 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.54■□□□□ 0.72
RAB40C-206ENST00000561781 HEPHQ9BQS7 1158 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 CRNKL1Q9BZJ0 848 aaKnown RBP19.54■□□□□ 0.72
RAB40C-206ENST00000561781 TPK1Q9H3S4 243 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 C17orf75Q9HAS0 396 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 S100A14Q9HCY8 104 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 NINJ2Q9NZG7 142 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 GCNT4Q9P109 453 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 GIT1Q9Y2X7 761 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-206ENST00000561781 SLC37A4O43826 429 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 CYP2D6P10635 497 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 XRCC5P13010 732 aaKnown RBP19.53■□□□□ 0.72
RAB40C-206ENST00000561781 STAT1P42224 750 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 MECOMQ03112 1051 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 ZBTB17Q13105 803 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 FRMD5Q7Z6J6 570 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 GPC2Q8N158 579 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 GMLQ99445 158 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 NMRK2Q9NPI5 230 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 TAS2R14Q9NYV8 317 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 A0A0G2JND7 137 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 GLTPD2A6NH11 291 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 B2RBV5 119 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 VCPP55072 806 aaKnown RBP19.53■□□□□ 0.72
RAB40C-206ENST00000561781 EDRF1Q3B7T1 1238 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 TBC1D10BQ4KMP7 808 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-206ENST00000561781 DNAL1Q4LDG9 190 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 HERC4Q5GLZ8 1057 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-206ENST00000561781 SEL1L2Q5TEA6 688 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 ULK2Q8IYT8 1036 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 ICA1LQ8NDH6 482 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 RFWD2Q8NHY2 731 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 MTBPQ96DY7 904 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 PHF12Q96QT6 1004 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 ZSWIM1Q9BR11 485 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 TRABDQ9H4I3 376 aa19.53■□□□□ 0.72
RAB40C-206ENST00000561781 LDHBP07195 334 aaKnown RBP19.52■□□□□ 0.72
RAB40C-206ENST00000561781 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-206ENST00000561781 FOLH1Q04609 750 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 PRUNE1Q86TP1 453 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 TRPM4Q8TD43 1214 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 OSBPL10Q9BXB5 764 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 MRPL1Q9BYD6 325 aaKnown RBP19.52■□□□□ 0.72
RAB40C-206ENST00000561781 CPVLQ9H3G5 476 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 Q9H521 79 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 IL17RBQ9NRM6 502 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 NEU2Q9Y3R4 380 aa19.52■□□□□ 0.72
RAB40C-206ENST00000561781 TNFAIP8O95379 198 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 ZNF12P17014 697 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 CDH2P19022 906 aaPredicted RBP19.52■□□□□ 0.71
RAB40C-206ENST00000561781 CA4P22748 312 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 STIP1P31948 543 aaKnown RBP19.52■□□□□ 0.71
RAB40C-206ENST00000561781 PHBP35232 272 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 BCAP31P51572 246 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 PEX5LQ8IYB4 626 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 OSBPL6Q9BZF3 934 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 RAB34Q9BZG1 259 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 GBA3Q9H227 469 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 TBC1D23Q9NUY8 699 aa19.52■□□□□ 0.71
RAB40C-206ENST00000561781 POTECB2RU33 542 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 DENRO43583 198 aaKnown RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 CYP2C9P11712 490 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 RPA3P35244 121 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 PPARGP37231 505 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 CCT8P50990 548 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 NR1H2P55055 460 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 PDAP1Q13442 181 aaKnown RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 C16orf72Q14CZ0 275 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 LRRC36Q1X8D7 754 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 KYAT3Q6YP21 454 aaKnown RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 STARD8Q92502 1023 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 PWWP2AQ96N64 755 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 RRN3Q9NYV6 651 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 SLC7A8Q9UHI5 535 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 PEX1O43933 1283 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 TCF7P36402 384 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 KRT17Q04695 432 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 SIX1Q15475 284 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-206ENST00000561781 FBXL19Q6PCT2 694 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 GDPD5Q8WTR4 605 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 SLCO2A1Q92959 643 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 TRIM11Q96F44 468 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 SNF8Q96H20 258 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 ZNF696Q9H7X3 374 aa19.51■□□□□ 0.71
RAB40C-206ENST00000561781 SEPT11Q9NVA2 429 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms