RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 MEIS1O00470 390 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 DHX15O43143 795 aaKnown RBP10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 LDOC1O95751 146 aaPredicted RBP10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 SRGAP2CP0DJJ0 459 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 ACADVLP49748 655 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 TARBP2Q15633 366 aaKnown RBP10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 C1QL3Q5VWW1 255 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 TSHZ3Q63HK5 1081 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 USP53Q70EK8 1073 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 FTSJ3Q8IY81 847 aaKnown RBP10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 CMTM8Q8IZV2 173 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 MMP21Q8N119 569 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 DNASE2BQ8WZ79 361 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 ATP2A3Q93084 1043 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 RRP36Q96EU6 259 aaKnown RBP10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 KIF9Q9HAQ2 790 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 PLAAQ9Y263 795 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 NFE2L3Q9Y4A8 694 aa10.42□□□□□ -0.74
AC010542.3-202ENST00000561728 E2F8A0AVK6 867 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 TMEM189-UBE2V1I3L0A0 370 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 CPB1P15086 417 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 GABRG2P18507 467 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 ALDH1A3P47895 512 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 IFNAR2P48551 515 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 NAA30Q147X3 362 aaPredicted RBP10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 PLA2G4DQ86XP0 818 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 DCBLD1Q8N8Z6 715 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 JPH2Q9BR39 696 aaPredicted RBP10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 ZNF577Q9BSK1 485 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 DNAJC25Q9H1X3 360 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 TBC1D22BQ9NU19 505 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 DUS2Q9NX74 493 aaKnown RBP10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 ZMYM5Q9UJ78 669 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 FBXL5Q9UKA1 691 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 CCL26Q9Y258 94 aa10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 RP1L1Q8IWN7 2480 aaPredicted RBP10.41□□□□□ -0.74
AC010542.3-202ENST00000561728 A0A087X0B3 334 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 CBX4O00257 560 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 TSPAN1O60635 241 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 CDC25CP30307 473 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 BRCC3P46736 316 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 PCBP1Q15365 356 aaKnown RBP eCLIP10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 CTXN3Q4LDR2 81 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 ZKSCAN2Q63HK3 967 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 MAMDC2Q7Z304 686 aaPredicted RBP10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 USP13Q92995 863 aaPredicted RBP10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 SGF29Q96ES7 293 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 CCNL2Q96S94 520 aaPredicted RBP10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 SLC46A2Q9BY10 475 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 ASB3Q9Y575 518 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 PCDHB1Q9Y5F3 818 aa10.4□□□□□ -0.74
AC010542.3-202ENST00000561728 WDR64B1ANS9 1081 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ZNF213O14771 459 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ADAM23O75077 832 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 NPTXRO95502 500 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 IL9RQ01113 521 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ILKQ13418 452 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 MTF1Q14872 753 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 KIF19Q2TAC6 998 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ZNF280DQ6N043 979 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 NIPA1Q7RTP0 329 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 DNAJB7Q7Z6W7 309 aaPredicted RBP10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ITIH5Q86UX2 942 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 FAM9BQ8IZU0 186 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 TTC16Q8NEE8 873 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 OSCP1Q8WVF1 389 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 IGSF8Q969P0 613 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ZDHHC4Q9NPG8 344 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 GEMIN8Q9NWZ8 242 aaKnown RBP10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ZSWIM5Q9P217 1185 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 ANAPC2Q9UJX6 822 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 SNX11Q9Y5W9 270 aa10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 NIPBLQ6KC79 2804 aaeCLIP10.39□□□□□ -0.75
AC010542.3-202ENST00000561728 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 WIPF3A6NGB9 483 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 LAD1O00515 517 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 PTGESO14684 152 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 GJB6O95452 261 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 NCAM1P13591 858 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 IGFBP6P24592 240 aaPredicted RBP10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 OPRD1P41143 372 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 LSSP48449 732 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 CSNK1EP49674 416 aaKnown RBP10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 USP4Q13107 963 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 UGCGQ16739 394 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 RFFLQ8WZ73 363 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 PGBD1Q96JS3 809 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 ACAP3Q96P50 834 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 POLR1BQ9H9Y6 1135 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 ADAMTS1Q9UHI8 967 aa10.38□□□□□ -0.75
AC010542.3-202ENST00000561728 SYN3O14994 580 aa10.37□□□□□ -0.75
AC010542.3-202ENST00000561728 SMARCA5O60264 1052 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms