RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 MCM8Q9UJA3 840 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 SHROOM2Q13796 1616 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 E7ENQ6 273 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 SPAG6O75602 509 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 TMCC1O94876 653 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 NME5P56597 212 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 CEP78Q5JTW2 689 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 WDR48Q8TAF3 677 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 GLMNQ92990 594 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 SCN3BQ9NY72 215 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 NDUFA13Q9P0J0 144 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 AP4S1Q9Y587 144 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 ARHGEF37A1IGU5 675 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 C3orf70A6NLC5 250 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 MAP3K7CLP57077 242 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 PLIN5Q00G26 463 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 DMPKQ09013 629 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 CCDC33Q8N5R6 958 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 ATP8B4Q8TF62 1192 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 MYLK2Q9H1R3 596 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 DNAJC16Q9Y2G8 782 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 FSBPO95073 299 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PCSK7Q16549 785 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 NSUN4Q96CB9 384 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 SH3GL1Q99961 368 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 SPON2Q9BUD6 331 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 RNF146Q9NTX7 359 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ABCC3O15438 1527 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 SUPT3HB4E1H0 165 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PYGLP06737 847 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 CDH2P19022 906 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 EFHC1Q5JVL4 640 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 AFG1LQ8WV93 481 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 USP13Q92995 863 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 MTMR8Q96EF0 704 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TOPORSQ9NS56 1045 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TMEM161AQ9NX61 479 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ADGRL3Q9HAR2 1447 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 E9PBE3 544 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PRR23D1E9PI22 279 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 FOXN3O00409 490 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 KLHL41O60662 606 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 MYO1DO94832 1006 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PRR23D2P0DMB1 279 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TPP2P29144 1249 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 RUNX1T1Q06455 604 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 DCAF4L1Q3SXM0 396 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 C11orf63Q6NUN7 778 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 FEZF2Q8TBJ5 459 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 OPTNQ96CV9 577 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 FAM167AQ96KS9 214 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 CRB1P82279 1406 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 OPLAHO14841 1288 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 CBX6O95503 412 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 HLA-DRAP01903 254 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 POLBP06746 335 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF23P17027 643 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 GTF2H1P32780 548 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 RC3H1Q5TC82 1133 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PLA2G4FQ68DD2 849 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 GPAT2Q6NUI2 795 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PATL1Q86TB9 770 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PAFAH2Q99487 392 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ETAA1Q9NY74 926 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 WHRNQ9P202 907 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 PYGMP11217 842 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 KCNK10P57789 538 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 SLC34A1Q06495 639 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 CDKAL1Q5VV42 579 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 BNC2Q6ZN30 1099 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 LPCAT2Q7L5N7 544 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF571Q7Z3V5 609 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 SETD3Q86TU7 594 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 HORMAD1Q86X24 394 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 APOBEC3FQ8IUX4 373 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 NSUN6Q8TEA1 469 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 GDPD5Q8WTR4 605 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 DCUN1D5Q9BTE7 237 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 FAM49BQ9NUQ9 324 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 CHD1O14646 1710 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TBC1D12O60347 775 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TBL3Q12788 808 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 C16orf72Q14CZ0 275 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 TTI2Q6NXR4 508 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 UBA3Q8TBC4 463 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ARHGEF1Q92888 912 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF669Q96BR6 464 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 NAALADL1Q9UQQ1 740 aa10.62□□□□□ -0.71
GTF3C1-202ENST00000561623 DYTNA2CJ06 578 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 RIPK2O43353 540 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 LZTS3O60299 673 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PSMA4P25789 261 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 EIF2B2P49770 351 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PRUNE1Q86TP1 453 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms