RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 TIMM13Q9Y5L4 95 aaPredicted RBP12.42□□□□□ -0.42
HERC1-214ENST00000561400 MYO7AQ13402 2215 aa12.42□□□□□ -0.42
HERC1-214ENST00000561400 FGF18O76093 207 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 WEE2P0C1S8 567 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 PPM1AP35813 382 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 RAP1GAPP47736 663 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 TNNC1P63316 161 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 LRIT3Q3SXY7 679 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 LIMS2Q7Z4I7 341 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 LSM14AQ8ND56 463 aaKnown RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 TMEM169Q96HH4 297 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 B3GALT6Q96L58 329 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 KREMEN1Q96MU8 473 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 TGS1Q96RS0 853 aaKnown RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 BCO2Q9BYV7 579 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 SMYD3Q9H7B4 428 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 CERS4Q9HA82 394 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 UBE2TQ9NPD8 197 aaPredicted RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 MCM8Q9UJA3 840 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 L1RE1Q9UN81 338 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 SF3B1O75533 1304 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■■■ 78.6
HERC1-214ENST00000561400 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 ADCY5O95622 1261 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 UCHL3P15374 230 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 TPP2P29144 1249 aaPredicted RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 ERVK-21P61565 698 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 CUL2Q13617 745 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 PPP2R2DQ66LE6 453 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 FBXO38Q6PIJ6 1188 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 VSTM4Q8IW00 320 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 MRFAP1L1Q96HT8 127 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 SLC28A3Q9HAS3 691 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
HERC1-214ENST00000561400 FHOD1Q9Y613 1164 aa12.41□□□□□ -0.42
HERC1-214ENST00000561400 SZT2Q5T011 3432 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 CARNS1A5YM72 827 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 TRAPPC3O43617 180 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 HUS1O60921 280 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 PYGBP11216 843 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 ZNF24P17028 368 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 ACTN2P35609 894 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 PLCB3Q01970 1234 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 GCNT1Q02742 428 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 IQCEQ6IPM2 695 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 APPL2Q8NEU8 664 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 KBTBD7Q8WVZ9 684 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 TIFAQ96CG3 184 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 MRPL45Q9BRJ2 306 aaKnown RBP12.4□□□□□ -0.42
HERC1-214ENST00000561400 PLVAPQ9BX97 442 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 NAA15Q9BXJ9 866 aaKnown RBP12.4□□□□□ -0.42
HERC1-214ENST00000561400 TTYH3Q9C0H2 523 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 RWDD3Q9Y3V2 267 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 NME7Q9Y5B8 376 aa12.4□□□□□ -0.42
HERC1-214ENST00000561400 ATG2AQ2TAZ0 1938 aa12.4□□□□□ -0.43
HERC1-214ENST00000561400 RNF225M0QZC1 329 aaPredicted RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 P4HA1P13674 534 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 FGFR3P22607 806 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 POLR2FP61218 127 aaKnown RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 RTP2Q5QGT7 225 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 DPH6Q7L8W6 267 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 DDX53Q86TM3 631 aaKnown RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 C3orf20Q8ND61 904 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 NLRC4Q9NPP4 1024 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 HCRTO43612 131 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 SOD2P04179 222 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 CYP11A1P05108 521 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 RB1P06400 928 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 ODC1P11926 461 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 CD58P19256 250 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 TBXAS1P24557 533 aaPredicted RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 DNAJB1P25685 340 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 PLA2G4AP47712 749 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 KRT17Q04695 432 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 ELAVL2Q12926 359 aaKnown RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 SNX1Q13596 522 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 ARHGAP44Q17R89 818 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 ACBD5Q5T8D3 534 aaPredicted RBP12.39□□□□□ -0.43
HERC1-214ENST00000561400 SPECC1LQ69YQ0 1117 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 TADA2BQ86TJ2 420 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 SPPL3Q8TCT6 385 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 SAMD11Q96NU1 681 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 GPR88Q9GZN0 384 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 CHST7Q9NS84 486 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 CISHQ9NSE2 258 aa12.39□□□□□ -0.43
HERC1-214ENST00000561400 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 GABRDO14764 452 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms