RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 PABPC1LQ4VXU2 614 aaKnown RBP18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 FAM171BQ6P995 826 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 IRF2BP1Q8IU81 584 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 DCP1BQ8IZD4 617 aaKnown RBP18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 TCEAL4Q96EI5 215 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 SEPT5Q99719 369 aaPredicted RBP18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 CORO1BQ9BR76 489 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 LRRC3Q9BY71 257 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 MUTYHQ9UIF7 546 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
KNSTRN-213ENST00000561169 F5P12259 2224 aa18.27■□□□□ 0.52
KNSTRN-213ENST00000561169 ASGR2P07307 311 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 GNL1P36915 607 aaPredicted RBP18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 TRIM59Q8IWR1 403 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 ST13P5Q8NFI4 369 aaPredicted RBP18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 OR6B3Q8NGW1 331 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 SPPL2BQ8TCT7 592 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 GPR152Q8TDT2 470 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 ING5Q8WYH8 240 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 TAF4BQ92750 862 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 MYLPFQ96A32 169 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 BCO2Q9BYV7 579 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 SNX25Q9H3E2 840 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 ZNF334Q9HCZ1 680 aaPredicted RBP18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 CDH9Q9ULB4 789 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 NR2E1Q9Y466 385 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 PCDHB5Q9Y5E4 795 aa18.27■□□□□ 0.51
KNSTRN-213ENST00000561169 NUP210Q8TEM1 1887 aaPredicted RBP18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 MOSPD3O75425 235 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 MBD3O95983 291 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 CEBPBP17676 345 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 CYP2F1P24903 491 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 ORC1Q13415 861 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 MGAT5BQ3V5L5 792 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 MDH1BQ5I0G3 518 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 PRSS36Q5K4E3 855 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 OTOP3Q7RTS5 596 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 ZDHHC14Q8IZN3 488 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 FBXL13Q8NEE6 735 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 ARID3AQ99856 593 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 NIF3L1Q9GZT8 377 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 METTL14Q9HCE5 456 aaKnown RBP18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 TMEM30AQ9NV96 361 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 HSFX1Q9UBD0 423 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 LIMD1Q9UGP4 676 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 COQ4Q9Y3A0 265 aa18.26■□□□□ 0.51
KNSTRN-213ENST00000561169 FAM163BP0C2L3 166 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 PTPN2P17706 415 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 FMO5P49326 533 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 EPHA5P54756 1037 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 MARSP56192 900 aaKnown RBP18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 SMARCB1Q12824 385 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 NFE2Q16621 373 aaPredicted RBP18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 NPAS3Q8IXF0 933 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 C2orf15Q8WU43 125 aaKnown RBP18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 FGF13Q92913 245 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 TATDN2Q93075 761 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 TWNKQ96RR1 684 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 SMOC2Q9H3U7 446 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 EPHX3Q9H6B9 360 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 AVENQ9NQS1 362 aaPredicted RBP18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 RAB20Q9NX57 234 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 ZNF318Q5VUA4 2279 aa18.25■□□□□ 0.51
KNSTRN-213ENST00000561169 MYO16Q9Y6X6 1858 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 A8MXQ7 604 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 STX10O60499 249 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 GJA1P17302 382 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 PTPN1P18031 435 aaKnown RBP18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 ALDH1A3P47895 512 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 NDST1P52848 882 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 CACNA2D1P54289 1103 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 EPHB3P54753 998 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 B3GALNT2Q8NCR0 500 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 MYCBPAPQ8TBZ2 947 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 CNOT6LQ96LI5 555 aaKnown RBP18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 ABCB6Q9NP58 842 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 EPS15L1Q9UBC2 864 aa18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 MRPS23Q9Y3D9 190 aaKnown RBP18.24■□□□□ 0.51
KNSTRN-213ENST00000561169 CLDN5O00501 218 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 MYL4P12829 197 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 LAMP2P13473 410 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 INCA1Q0VD86 236 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 PLD1Q13393 1074 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 MTMR3Q13615 1198 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 DDR2Q16832 855 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 CFAP221Q4G0U5 840 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 C11orf57Q6ZUT1 292 aaPredicted RBP18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 GAREM2Q75VX8 874 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 DNAJB7Q7Z6W7 309 aaPredicted RBP18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 ACOT1Q86TX2 421 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 SHKBP1Q8TBC3 707 aa18.23■□□□□ 0.51
KNSTRN-213ENST00000561169 WHAMMQ8TF30 809 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms