RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TAF2Q6P1X5 1199 aa5.54□□□□□ -1.52
PSMA4-221ENST00000560842 FAM109AQ8N4B1 249 aa5.54□□□□□ -1.52
PSMA4-221ENST00000560842 PSD4Q8NDX1 1056 aa5.54□□□□□ -1.52
PSMA4-221ENST00000560842 SMURF2Q9HAU4 748 aa5.54□□□□□ -1.52
PSMA4-221ENST00000560842 TBCCD1Q9NVR7 557 aa5.54□□□□□ -1.52
PSMA4-221ENST00000560842 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.54□□□□□ -1.52
PSMA4-221ENST00000560842 CPA4Q9UI42 421 aa5.54□□□□□ -1.52
PSMA4-221ENST00000560842 M0QYG6 137 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 GOLIM4O00461 696 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 UNC5CO95185 931 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 ITGAMP11215 1152 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 MPLP40238 635 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 VIPR2P41587 438 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 AVPR1BP47901 424 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 FPGSQ05932 587 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 CD300EQ496F6 205 aaPredicted RBP5.53□□□□□ -1.52
PSMA4-221ENST00000560842 VWA1Q6PCB0 445 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 LCORLQ8N3X6 602 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 FAM98AQ8NCA5 519 aaKnown RBP5.53□□□□□ -1.52
PSMA4-221ENST00000560842 SNX19Q92543 992 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 SUCLG2Q96I99 432 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 P2RX7Q99572 595 aaKnown RBP5.53□□□□□ -1.52
PSMA4-221ENST00000560842 BHMT2Q9H2M3 363 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 ALG13Q9NP73 1137 aaKnown RBP5.53□□□□□ -1.52
PSMA4-221ENST00000560842 KCTD5Q9NXV2 234 aa5.53□□□□□ -1.52
PSMA4-221ENST00000560842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.53□□□□□ -1.52
PSMA4-221ENST00000560842 TRGV11A0A075B6L2 103 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 A0A087WWL8 130 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 DCLK1O15075 740 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 TBX3O15119 743 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 ESRRBO95718 433 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 KITP10721 976 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 MYF5P13349 255 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 SEC24CP53992 1094 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 ELLP55199 621 aaPredicted RBP5.52□□□□□ -1.53
PSMA4-221ENST00000560842 WNT3P56703 355 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 FOXI1Q12951 378 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 SEMA5AQ13591 1074 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 POLD3Q15054 466 aaPredicted RBP5.52□□□□□ -1.53
PSMA4-221ENST00000560842 AMOTQ4VCS5 1084 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 RNF220Q5VTB9 566 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 FAM9AQ8IZU1 332 aaPredicted RBP5.52□□□□□ -1.53
PSMA4-221ENST00000560842 FAM46DQ8NEK8 389 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 SSH3Q8TE77 659 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 LRTOMTQ8WZ04 291 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 TTC17Q96AE7 1141 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 TMEM125Q96AQ2 219 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 PTCD3Q96EY7 689 aaKnown RBP5.52□□□□□ -1.53
PSMA4-221ENST00000560842 APIPQ96GX9 242 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 Q96MF0 132 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 SMOC2Q9H3U7 446 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 RAD54BQ9Y620 910 aa5.52□□□□□ -1.53
PSMA4-221ENST00000560842 USP19O94966 1318 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 CFAP69A5D8W1 941 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 TOR1BO14657 336 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 MARCH6O60337 910 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 GRPP07492 148 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 NPTX2P47972 431 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 GCLCP48506 637 aaPredicted RBP5.51□□□□□ -1.53
PSMA4-221ENST00000560842 KCNJ5P48544 419 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 SLC11A2P49281 568 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 LONRF3Q496Y0 759 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 DARS2Q6PI48 645 aaKnown RBP5.51□□□□□ -1.53
PSMA4-221ENST00000560842 SLC30A10Q6XR72 485 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 Q6ZNX1 250 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 KRT78Q8N1N4 520 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 OR6B3Q8NGW1 331 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 SLC9A6Q92581 669 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 MAML1Q92585 1016 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
PSMA4-221ENST00000560842 MESP1Q9BRJ9 268 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 XPR1Q9UBH6 696 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 TPCN1Q9ULQ1 816 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 FRMD4BQ9Y2L6 1034 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 PAXBP1Q9Y5B6 917 aa5.51□□□□□ -1.53
PSMA4-221ENST00000560842 A0A0B4J269 797 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 WDR27A2RRH5 827 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 BTN3A1O00481 513 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 HMGB1P09429 215 aaKnown RBP5.5□□□□□ -1.53
PSMA4-221ENST00000560842 ATXN1LP0C7T5 689 aaKnown RBP5.5□□□□□ -1.53
PSMA4-221ENST00000560842 CYP2C9P11712 490 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 RPL17P18621 184 aaKnown RBP5.5□□□□□ -1.53
PSMA4-221ENST00000560842 SLC7A1P30825 629 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 PTH2RP49190 550 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 NDUFV1P49821 464 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 UCP3P55916 312 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 CTBP1Q13363 440 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 MPP3Q13368 585 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 TUBB3Q13509 450 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 IQCB1Q15051 598 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 PTPRRQ15256 657 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 SF3B3Q15393 1217 aaKnown RBP5.5□□□□□ -1.53
PSMA4-221ENST00000560842 ERCC6LQ2NKX8 1250 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 ZNF783Q6ZMS7 281 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 CCDC149Q6ZUS6 474 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 MICU3Q86XE3 530 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 GAS2L3Q86XJ1 694 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 SIMC1Q8NDZ2 872 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 LPIN2Q92539 896 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms