RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 GPR152Q8TDT2 470 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 RSAD2Q8WXG1 361 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 FGF13Q92913 245 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 ZNF512Q96ME7 567 aaPredicted RBP12.93□□□□□ -0.34
USP8-212ENST00000560730 CEP63Q96MT8 703 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 LRRC3Q9BY71 257 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 SMOC2Q9H3U7 446 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 DPEP3Q9H4B8 488 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 TMEM8AQ9HCN3 771 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP8-212ENST00000560730 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 PCDHB5Q9Y5E4 795 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 MYH10P35580 1976 aa12.93□□□□□ -0.34
USP8-212ENST00000560730 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 MOSPD3O75425 235 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 CLSTN1O94985 981 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 CEBPBP17676 345 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 GTF2H1P32780 548 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 ALDH1A3P47895 512 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 EPHB3P54753 998 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 SMARCB1Q12824 385 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 PTPN21Q16825 1174 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 CBWD6Q4V339 395 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 DCAF17Q5H9S7 520 aaPredicted RBP12.92□□□□□ -0.34
USP8-212ENST00000560730 CBWD3Q5JTY5 395 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 CBWD5Q5RIA9 395 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 SDHAF4Q5VUM1 108 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 FOXR2Q6PJQ5 311 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 NPAS3Q8IXF0 933 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 ELMOD1Q8N336 334 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 GIPC2Q8TF65 315 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 C2orf15Q8WU43 125 aaKnown RBP12.92□□□□□ -0.34
USP8-212ENST00000560730 SLC35C1Q96A29 364 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
USP8-212ENST00000560730 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 AVENQ9NQS1 362 aaPredicted RBP12.92□□□□□ -0.34
USP8-212ENST00000560730 EPS15L1Q9UBC2 864 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 HSFX1Q9UBD0 423 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 ARMCX3Q9UH62 379 aaPredicted RBP12.92□□□□□ -0.34
USP8-212ENST00000560730 CDH7Q9ULB5 785 aa12.92□□□□□ -0.34
USP8-212ENST00000560730 MRPS23Q9Y3D9 190 aaKnown RBP12.92□□□□□ -0.34
USP8-212ENST00000560730 TRIOO75962 3097 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 MYL4P12829 197 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 GJA1P17302 382 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 ASPAP45381 313 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 TUFMP49411 452 aaKnown RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 EPHA5P54756 1037 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 ZXDAP98168 799 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 NFE2Q16621 373 aaPredicted RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 DDR2Q16832 855 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 KRT39Q6A163 491 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 IQCEQ6IPM2 695 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 FRMD5Q7Z6J6 570 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 TAF4BQ92750 862 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 MCRS1Q96EZ8 462 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 SRRTQ9BXP5 876 aaKnown RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 KCNK12Q9HB15 430 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 HMGXB4Q9UGU5 601 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
USP8-212ENST00000560730 ZNF638Q14966 1978 aaKnown RBP12.91□□□□□ -0.34
USP8-212ENST00000560730 OBSL1O75147 1896 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 A8MXQ7 604 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ALADP13716 330 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 MXI1P50539 228 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 NOP14P78316 857 aaKnown RBP12.9□□□□□ -0.34
USP8-212ENST00000560730 PLD1Q13393 1074 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ORC1Q13415 861 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 CYP4A22Q5TCH4 519 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 PARM1Q6UWI2 310 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 GAREM2Q75VX8 874 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
USP8-212ENST00000560730 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
USP8-212ENST00000560730 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 FBXL13Q8NEE6 735 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 SHKBP1Q8TBC3 707 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 MYCBPAPQ8TBZ2 947 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 EDAQ92838 391 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 TATDN2Q93075 761 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 PSMG2Q969U7 264 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 MYLPFQ96A32 169 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ZSWIM3Q96MP5 696 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ASAH2Q9NR71 780 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ASB3Q9Y575 518 aa12.9□□□□□ -0.34
USP8-212ENST00000560730 ANAPC1Q9H1A4 1944 aa12.9□□□□□ -0.35
USP8-212ENST00000560730 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms