RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 HNRNPLP14866 589 aaKnown RBP eCLIP10.74□□□□□ -0.694e-7■■□□□ 13.3
TPM1-225ENST00000560679 AVPR1AP37288 418 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 MAPK8P45983 427 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 NLRP12P59046 1061 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 LILRA4P59901 499 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 FAM193AP78312 1265 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 SIM1P81133 766 aaPredicted RBP10.74□□□□□ -0.69
TPM1-225ENST00000560679 BFSP1Q12934 665 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 USP4Q13107 963 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 VEPH1Q14D04 833 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 PDGFRLQ15198 375 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 ZNF77Q15935 545 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 TRIM61Q5EBN2 209 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 ANO7Q6IWH7 933 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 ARMCX5Q6P1M9 558 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 TMEM161BQ8NDZ6 487 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 OLIG1Q8TAK6 271 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 PIGKQ92643 395 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 CD101Q93033 1021 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 CNOT6LQ96LI5 555 aaKnown RBP10.74□□□□□ -0.69
TPM1-225ENST00000560679 PLEKHA5Q9HAU0 1116 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 TMEM74BQ9NUR3 256 aa10.74□□□□□ -0.69
TPM1-225ENST00000560679 UBQLN1Q9UMX0 589 aaKnown RBP10.74□□□□□ -0.69
TPM1-225ENST00000560679 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 LACTBL1A8MY62 500 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 CYP11A1P05108 521 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 CLTAP09496 248 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 HAPLN1P10915 354 aaPredicted RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 ENGP17813 658 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 DDX6P26196 483 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM1-225ENST00000560679 PTGER3P43115 390 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 DHPSP49366 369 aaPredicted RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 TUFMP49411 452 aaKnown RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 GPR15P49685 360 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM1-225ENST00000560679 PPP2R3AQ06190 1150 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 SEMA3BQ13214 749 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ZNF268Q14587 947 aaPredicted RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 MTF1Q14872 753 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ZNF174Q15697 407 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ENOX2Q16206 610 aaKnown RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 GAB4Q2WGN9 574 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 EML3Q32P44 896 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 USP39Q53GS9 565 aaKnown RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 SPATA1Q5VX52 437 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 C9orf57Q5W0N0 161 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 RINT1Q6NUQ1 792 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 C19orf48Q6RUI8 117 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ZPBP2Q6X784 338 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 C1orf186Q6ZWK4 172 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ARMCX6Q7L4S7 300 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 KCNK18Q7Z418 384 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 PDZD3Q86UT5 571 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 C11orf74Q86VG3 221 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 LRRTM3Q86VH5 581 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 C4orf32Q8N8J7 132 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 USP33Q8TEY7 942 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 OSCP1Q8WVF1 389 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 DRC1Q96MC2 740 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 BBC3Q96PG8 261 aaPredicted RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 FNBP1Q96RU3 617 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 SLC22A12Q96S37 553 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 NTPCRQ9BSD7 190 aaKnown RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 FSCN3Q9NQT6 498 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ZMYM5Q9UJ78 669 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 WNT6Q9Y6F9 365 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ADAMTS9Q9P2N4 1935 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 MYH11P35749 1972 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ATXN2Q99700 1313 aaKnown RBP10.73□□□□□ -0.69
TPM1-225ENST00000560679 APC2O95996 2303 aa10.73□□□□□ -0.69
TPM1-225ENST00000560679 ANAPC1Q9H1A4 1944 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 PI4KAP42356 2102 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SFI1A8K8P3 1242 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 PP2D1A8MPX8 630 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 UPK3BL1B0FP48 263 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 UPK3BL2E5RIL1 263 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 K7EQS6 105 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 CLDN3O15551 220 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ZIC2O95409 532 aaPredicted RBP10.72□□□□□ -0.69
TPM1-225ENST00000560679 ADRB2P07550 413 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 NFICP08651 508 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 P2RY2P41231 377 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SEC13P55735 322 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 AMPD2Q01433 879 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 GUCY1B3Q02153 619 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ST3GAL1Q11201 340 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 LMAN2Q12907 356 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 PSMD2Q13200 908 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
TPM1-225ENST00000560679 NBR1Q14596 966 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ME3Q16798 604 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SDHAF4Q5VUM1 108 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
TPM1-225ENST00000560679 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 RAB44Q7Z6P3 723 aaPredicted RBP10.72□□□□□ -0.69
TPM1-225ENST00000560679 MON1AQ86VX9 555 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SFTPA1Q8IWL2 248 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 CHCHD4Q8N4Q1 142 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms