RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ANO7Q6IWH7 933 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 ARMCX5Q6P1M9 558 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 CC2D1AQ6P1N0 951 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 MDGA1Q8NFP4 955 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 OLIG1Q8TAK6 271 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 USP33Q8TEY7 942 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 RLN3Q8WXF3 142 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 SENP8Q96LD8 212 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 CNOT6LQ96LI5 555 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 GCNAQ96QF7 691 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 FNBP1Q96RU3 617 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 HAPLN2Q9GZV7 340 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 KIF9Q9HAQ2 790 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 FSCN3Q9NQT6 498 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 ORC3Q9UBD5 711 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 HELZ2Q9BYK8 2649 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 TNFRSF10BO14763 440 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 PFKFB2O60825 505 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 SEC24BO95487 1268 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 HAPLN1P10915 354 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 MUTP22033 750 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 MCM7P33993 719 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 RDXP35241 583 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 PTGER3P43115 390 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 ZNF268Q14587 947 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 PDGFRLQ15198 375 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 TAF12Q16514 161 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 CRY1Q16526 586 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 EML3Q32P44 896 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 C2orf27AQ580R0 203 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 TMEM92Q6UXU6 159 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 ARMCX6Q7L4S7 300 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 LRRTM3Q86VH5 581 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 MON1AQ86VX9 555 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 SYT12Q8IV01 421 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 TMEFF1Q8IYR6 380 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 CPA6Q8N4T0 437 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 CCDC33Q8N5R6 958 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 OSCP1Q8WVF1 389 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 HNRNPLLQ8WVV9 542 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 EXOC4Q96A65 974 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 TM6SF1Q9BZW5 370 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 ZCWPW1Q9H0M4 648 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 PLEKHA5Q9HAU0 1116 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 BRMS1Q9HCU9 246 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 KMT5AQ9NQR1 393 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 PDRG1Q9NUG6 133 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 DUS2Q9NX74 493 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 ANKFY1Q9P2R3 1169 aa9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 UBQLN1Q9UMX0 589 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 RBM19Q9Y4C8 960 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-217ENST00000560521 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 LACTBL1A8MY62 500 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 SLC16A4O15374 487 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 HIP1RO75146 1068 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 TOM1L1O75674 476 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 CD59P13987 128 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 CCT6AP40227 531 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 OPRD1P41143 372 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 P2RY2P41231 377 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 TNFSF9P41273 254 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 SEC13P55735 322 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 MAPK7Q13164 816 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 MTF1Q14872 753 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 ZNF77Q15935 545 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 ZNF423Q2M1K9 1284 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 PEAR1Q5VY43 1037 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 LPCAT2Q7L5N7 544 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 DIS3L2Q8IYB7 885 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 WASF1Q92558 559 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 SLC22A12Q96S37 553 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 CYP2S1Q96SQ9 504 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 ATXN2Q99700 1313 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 NTPCRQ9BSD7 190 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 LINC00597Q9H2U6 94 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 PILRBQ9UKJ0 227 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 MMP17Q9ULZ9 603 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 KIAA1024Q9UPX6 916 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 WNT6Q9Y6F9 365 aa9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 ASH1LQ9NR48 2969 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-217ENST00000560521 KNTC1P50748 2209 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CABIN1Q9Y6J0 2220 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 E9PMD0 336 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 PIRO00625 290 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CLDN3O15551 220 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 MAP3K13O43283 966 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 OPHN1O60890 802 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 TADA3O75528 432 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CYP11A1P05108 521 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 ODC1P11926 461 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 ITPKAP23677 461 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 GPR15P49685 360 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms