RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 MYL4P12829 197 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 ACVR2AP27037 513 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 GCLCP48506 637 aaPredicted RBP6.69□□□□□ -1.34
MARK3-220ENST00000560417 ANXA11P50995 505 aaKnown RBP6.69□□□□□ -1.34
MARK3-220ENST00000560417 LOXL3P58215 753 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 FAM189BP81408 668 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 MC2RQ01718 297 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 ZIK1Q3SY52 487 aaPredicted RBP6.69□□□□□ -1.34
MARK3-220ENST00000560417 PLA1AQ53H76 456 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 RABL3Q5HYI8 236 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.69□□□□□ -1.34
MARK3-220ENST00000560417 SPATA31D4Q6ZUB0 917 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 ZNF280BQ86YH2 543 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 NKAPQ8N5F7 415 aaKnown RBP6.69□□□□□ -1.34
MARK3-220ENST00000560417 CXorf38Q8TB03 319 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 PPP1R9BQ96SB3 815 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 SLC46A2Q9BY10 475 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 GOLGA2P5Q9HBQ8 144 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 TM7SF3Q9NS93 570 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 AURKAIP1Q9NWT8 199 aaPredicted RBP6.69□□□□□ -1.34
MARK3-220ENST00000560417 TBC1D30Q9Y2I9 924 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 TCAF1Q9Y4C2 921 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 FPGT-TNNI3KV9GXZ4 949 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 SPATA31A3Q5VYP0 1347 aa6.69□□□□□ -1.34
MARK3-220ENST00000560417 PRAMEF33A0A0G2JMD5 474 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 LOC102723971A0A1B0GUV8 181 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 HNRNPDLO14979 420 aaKnown RBP6.68□□□□□ -1.34
MARK3-220ENST00000560417 PIP5K1CO60331 668 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 PRAMEF10O60809 474 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 NBNO60934 754 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 SCAF4O95104 1147 aaKnown RBP6.68□□□□□ -1.34
MARK3-220ENST00000560417 CHRM3P20309 590 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 GABRB3P28472 473 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 LILRA4P59901 499 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 DYRK1AQ13627 763 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 TRIM14Q14142 442 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 ARHGEF7Q14155 803 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 SLC29A2Q14542 456 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 STARD3Q14849 445 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 NFIXQ14938 502 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 PRKD1Q15139 912 aaPredicted RBP6.68□□□□□ -1.34
MARK3-220ENST00000560417 RRAGBQ5VZM2 374 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 ZNF585AQ6P3V2 769 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 FOXR2Q6PJQ5 311 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 C18orf8Q96DM3 657 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 BOD1Q96IK1 185 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 LOXL4Q96JB6 756 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 HERPUD2Q9BSE4 406 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 DEF6Q9H4E7 631 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 ZNF768Q9H5H4 540 aaKnown RBP6.68□□□□□ -1.34
MARK3-220ENST00000560417 ZNF703Q9H7S9 590 aaPredicted RBP6.68□□□□□ -1.34
MARK3-220ENST00000560417 TMEM74BQ9NUR3 256 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 TBC1D23Q9NUY8 699 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 DNMT3BQ9UBC3 853 aaKnown RBP6.68□□□□□ -1.34
MARK3-220ENST00000560417 DKK4Q9UBT3 224 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 HDAC9Q9UKV0 1011 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 SHOC2Q9UQ13 582 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 TESMINQ9Y4I5 508 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 CEP83Q9Y592 693 aa6.68□□□□□ -1.34
MARK3-220ENST00000560417 GOLGA6L3A6NEY3 463 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 PLSCR1O15162 318 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 FFAR2O15552 330 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 INMTO95050 263 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 PDIA3P30101 505 aaKnown RBP6.67□□□□□ -1.34
MARK3-220ENST00000560417 LRPAP1P30533 357 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 HALP42357 657 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 ALDH9A1P49189 494 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 CPT1AP50416 773 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 COPAP53621 1224 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 CXADRP78310 365 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 ICA1Q05084 483 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 HLXQ14774 488 aaPredicted RBP6.67□□□□□ -1.34
MARK3-220ENST00000560417 PUM3Q15397 648 aaKnown RBP6.67□□□□□ -1.34
MARK3-220ENST00000560417 ZRSR2Q15696 482 aaKnown RBP6.67□□□□□ -1.34
MARK3-220ENST00000560417 CYP2A13Q16696 494 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 INSCQ1MX18 579 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 C4orf46Q504U0 113 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 PGBD2Q6P3X8 592 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 CLNKQ7Z7G1 428 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 GLIS1Q8NBF1 620 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 CPT1CQ8TCG5 803 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 FUBP1Q96AE4 644 aaKnown RBP6.67□□□□□ -1.34
MARK3-220ENST00000560417 NACC2Q96BF6 587 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 LRRC46Q96FV0 321 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 KLC2Q9H0B6 622 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 AS3MTQ9HBK9 375 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 RNF181Q9P0P0 153 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 CEP72Q9P209 647 aa6.67□□□□□ -1.34
MARK3-220ENST00000560417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.67□□□□□ -1.34
MARK3-220ENST00000560417 FAM234BA2RU67 622 aa6.66□□□□□ -1.34
MARK3-220ENST00000560417 MYADML2A6NDP7 307 aa6.66□□□□□ -1.34
MARK3-220ENST00000560417 H7C4K7 107 aa6.66□□□□□ -1.34
MARK3-220ENST00000560417 CREB3O43889 395 aa6.66□□□□□ -1.34
MARK3-220ENST00000560417 NDST3O95803 873 aa6.66□□□□□ -1.34
MARK3-220ENST00000560417 ZFP36P26651 326 aaKnown RBP6.66□□□□□ -1.34
MARK3-220ENST00000560417 PXNP49023 591 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms