RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZSCAN32Q9NX65 697 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 CRLS1Q9UJA2 301 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 CDH16O75309 829 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 SPRP35270 261 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 LHX1P48742 406 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 PTK6Q13882 451 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 NFE2Q16621 373 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 NAPEPLDQ6IQ20 393 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 TRIM17Q9Y577 477 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 TARSL2A2RTX5 802 aaKnown RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 PTGER2P43116 358 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 FAM180AQ6UWF9 173 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 OOSP2Q86WS3 158 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 IPPQ9Y573 584 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 C5orf58C9J3I9 102 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 LZTS3O60299 673 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 AVPR1AP37288 418 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 FXR1P51114 621 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 BCAT1P54687 386 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 C4orf22Q6V702 233 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 SETD4Q9NVD3 440 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 ALG6Q9Y672 507 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 C2orf81A6NN90 581 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 ANXA9O76027 345 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 ADORA2AP29274 412 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 TRABDQ9H4I3 376 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 TRPM5Q9NZQ8 1165 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 STX18Q9P2W9 335 aaKnown RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 LY6KQ17RY6 165 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 COG1Q8WTW3 980 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 NWD1Q149M9 1564 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 KRT72Q14CN4 511 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 ACAD10Q6JQN1 1059 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 LRRC8EQ6NSJ5 796 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 GRAMD1AQ96CP6 724 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 CYFIP2Q96F07 1278 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 ALG13Q9NP73 1137 aaKnown RBP14.03□□□□□ -0.16
TRAF3-208ENST00000560371 VPS9D1Q9Y2B5 631 aa14.03□□□□□ -0.16
TRAF3-208ENST00000560371 SUPT3HB4E1H0 165 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 ARIH2O95376 493 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 GARTP22102 1010 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 SERPINB9P50453 376 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 ZC3H12BQ5HYM0 836 aaKnown RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 SNX31Q8N9S9 440 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 HPS5Q9UPZ3 1129 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 CASTOR2A6NHX0 329 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 MED24O75448 989 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 CTDNEP1O95476 244 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 C1orf131Q8NDD1 294 aaKnown RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 DPF2Q92785 391 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 ABHD8Q96I13 439 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 KIAA1683Q9H0B3 1180 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 BRD8Q9H0E9 1235 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 A0A087WZ62 844 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 H0Y3Z8 333 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 STX7O15400 261 aaKnown RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 WEE1P30291 646 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 TTLL9Q3SXZ7 439 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 KLHDC7AQ5VTJ3 777 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 DDI1Q8WTU0 396 aa14.02□□□□□ -0.16
TRAF3-208ENST00000560371 FDXACB1Q9BRP7 624 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-208ENST00000560371 HSPA9P38646 679 aaKnown RBP14.02□□□□□ -0.17
TRAF3-208ENST00000560371 PEX19P40855 299 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 CCDC157Q569K6 752 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 FAM32AQ9Y421 112 aaKnown RBP14.02□□□□□ -0.17
TRAF3-208ENST00000560371 F9P00740 461 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 LAMTOR4Q0VGL1 99 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 STN1Q9H668 368 aaKnown RBP14.02□□□□□ -0.17
TRAF3-208ENST00000560371 XPNPEP3Q9NQH7 507 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 PLA2G4CQ9UP65 541 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 DDHD2O94830 711 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 MCF2P10911 925 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 DSG3P32926 999 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 UGT3A1Q6NUS8 523 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 OLFML3Q9NRN5 406 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 ADAM21Q9UKJ8 722 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 MRFAP1Q9Y605 127 aa14.02□□□□□ -0.17
TRAF3-208ENST00000560371 INSRRP14616 1297 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ELAVL2Q12926 359 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 USP50Q70EL3 339 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 DNAJB3Q8WWF6 145 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 LRRC1Q9BTT6 524 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 RNF208Q9H0X6 261 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ASCC2Q9H1I8 757 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 MYH11P35749 1972 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ADGRA2Q96PE1 1338 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 TNS2Q63HR2 1409 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 MEFVO15553 781 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 SYNCRIPO60506 623 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 MYL2P10916 166 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 AP2B1P63010 937 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ZNF280DQ6N043 979 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms