RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
IRF9-209ENST00000560365 LNP1A1A4G5 178 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 DCLK1O15075 740 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
IRF9-209ENST00000560365 ALDH1A2O94788 518 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 FAM13AO94988 1023 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
IRF9-209ENST00000560365 CKMP06732 381 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 NFICP08651 508 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 RDXP35241 583 aaKnown RBP12.52□□□□□ -0.41
IRF9-209ENST00000560365 RPL10AP62906 217 aaKnown RBP12.52□□□□□ -0.41
IRF9-209ENST00000560365 ZNF268Q14587 947 aaPredicted RBP12.52□□□□□ -0.41
IRF9-209ENST00000560365 UAP1L1Q3KQV9 507 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 SV2CQ496J9 727 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 TXNDC8Q6A555 127 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 MON1AQ86VX9 555 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 MYCT1Q8N699 235 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 FSIP1Q8NA03 581 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
IRF9-209ENST00000560365 CHFRQ96EP1 664 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 ASB7Q9H672 318 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 ODF2LQ9ULJ1 636 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 TBX20Q9UMR3 447 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 CFAP47Q6ZTR5 3102 aa12.52□□□□□ -0.41
IRF9-209ENST00000560365 TRAV19A0A0A6YYK7 116 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 OTOL1A6NHN0 477 aaPredicted RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 PIRO00625 290 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 GIPC1O14908 333 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 F11P03951 625 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 ADRB2P07550 413 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 CSRP1P21291 193 aaKnown RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.41
IRF9-209ENST00000560365 DHPSP49366 369 aaPredicted RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 PDE6CP51160 858 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 FAM160A1Q05DH4 1040 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 LMAN2Q12907 356 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 ACAP1Q15027 740 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 OSCP1Q8WVF1 389 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 SPACA7Q96KW9 195 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 ZNF560Q96MR9 790 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 PLIN2Q99541 437 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 NUSAP1Q9BXS6 441 aaKnown RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 TPSD1Q9BZJ3 242 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 ZHX3Q9H4I2 956 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
IRF9-209ENST00000560365 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
IRF9-209ENST00000560365 CHD6Q8TD26 2715 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 A0A0B4J269 797 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 ANO9A1A5B4 782 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 KPNA7A9QM74 516 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 MAP3K13O43283 966 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 TBCAO75347 108 aaKnown RBP12.5□□□□□ -0.41
IRF9-209ENST00000560365 NFATC1O95644 943 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 PIGRP01833 764 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 SPINK2P20155 84 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 PNPLA4P41247 253 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 SLC12A3P55017 1021 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 KCNB1Q14721 858 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 HYIQ5T013 277 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 WSCD1Q658N2 575 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 ANO7Q6IWH7 933 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 RASSF8Q8NHQ8 419 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 ZCCHC14Q8WYQ9 949 aaKnown RBP12.5□□□□□ -0.41
IRF9-209ENST00000560365 CALML4Q96GE6 196 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 ZSCAN31Q96LW9 406 aaPredicted RBP12.5□□□□□ -0.41
IRF9-209ENST00000560365 MMTAG2Q9BU76 263 aaKnown RBP12.5□□□□□ -0.41
IRF9-209ENST00000560365 SCNM1Q9BWG6 230 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 POLR3BQ9NW08 1133 aaPredicted RBP12.5□□□□□ -0.41
IRF9-209ENST00000560365 INVSQ9Y283 1065 aa12.5□□□□□ -0.41
IRF9-209ENST00000560365 PDCD11Q14690 1871 aaKnown RBP12.49□□□□□ -0.41
IRF9-209ENST00000560365 NPHP3-ACAD11A0A0J9YXS1 232 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 TRAK2O60296 914 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 FAM189A1O60320 539 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 HUS1O60921 280 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 HMGA1P17096 107 aaKnown RBP12.49□□□□□ -0.41
IRF9-209ENST00000560365 DPP6P42658 865 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 ACOT2P49753 483 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 TOB1P50616 345 aaPredicted RBP12.49□□□□□ -0.41
IRF9-209ENST00000560365 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
IRF9-209ENST00000560365 MYL7Q01449 175 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 ST3GAL1Q11201 340 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
IRF9-209ENST00000560365 C2orf27AQ580R0 203 aa12.49□□□□□ -0.41
IRF9-209ENST00000560365 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms