RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 IL9RQ01113 521 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NRG1Q02297 640 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF252P-AS1Q0IIN9 211 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 GRB10Q13322 594 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 MTA1Q13330 715 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 SNX1Q13596 522 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 C2orf27AQ580R0 203 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ARSHQ5FYA8 562 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 WIPI1Q5MNZ9 446 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM26FQ5R3K3 315 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 TRAPPC3LQ5T215 181 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM91A1Q658Y4 838 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PSAPL1Q6NUJ1 521 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 DPY19L2P1Q6NXN4 242 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 C16orf86Q6ZW13 317 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF571Q7Z3V5 609 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NEK8Q86SG6 692 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 VSIG1Q86XK7 387 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ECHDC2Q86YB7 292 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 RHOT2Q8IXI1 618 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC65Q8IXS2 484 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM133AQ8N9E0 248 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM13CQ8NE31 585 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PIP4K2CQ8TBX8 421 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 FBXO25Q8TCJ0 367 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 GPBAR1Q8TDU6 330 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC8CQ8TDW0 803 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 THAP3Q8WTV1 239 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NUDT8Q8WV74 236 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 GATA6Q92908 595 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ARHGEF2Q92974 986 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ELMO3Q96BJ8 720 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CDK5RAP3Q96JB5 506 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 MAML3Q96JK9 1138 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 GBP5Q96PP8 586 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 TGS1Q96RS0 853 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NUDCD1Q96RS6 583 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 RPS6KC1Q96S38 1066 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NAP1L4Q99733 375 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 LPIN3Q9BQK8 851 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CORO1BQ9BR76 489 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 RIOK1Q9BRS2 568 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CENPKQ9BS16 269 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 TRIM51Q9BSJ1 452 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 BRINP2Q9C0B6 783 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NKIRAS1Q9NYS0 192 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 SENP1Q9P0U3 644 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 DLGAP2Q9P1A6 1054 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ARPP21Q9UBL0 812 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 USP21Q9UK80 565 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 TBC1D30Q9Y2I9 924 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CD2APQ9Y5K6 639 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CORINQ9Y5Q5 1042 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NHSQ6T4R5 1651 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 NAV1Q8NEY1 1877 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 RBBP6Q7Z6E9 1792 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 A0A1W2PQH9 124 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 H3BRJ5 948 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 TRAF5O00463 557 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 NDC80O14777 642 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CETN3O15182 167 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CDH16O75309 829 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 MTA2O94776 668 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 TJP3O95049 919 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 HTR3BO95264 441 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ASMTLO95671 621 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ABHD2P08910 425 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CPA3P15088 417 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 UCHL3P15374 230 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SELPP16109 830 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 VCAM1P19320 739 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 KCNA3P22001 575 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CYP7A1P22680 504 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 STAT1P42224 750 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 IFNAR2P48551 515 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ARL4DP49703 201 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 DNA2P51530 1060 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CACNA2D1P54289 1103 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 PLTPP55058 493 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC34A1Q06495 639 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 AP1B1Q10567 949 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 COASYQ13057 564 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 LSAMPQ13449 338 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 MOGSQ13724 837 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ITGA9Q13797 1035 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 STAT4Q14765 748 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 RASA2Q15283 850 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 NFIL3Q16649 462 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC45A4Q5BKX6 768 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SEL1L2Q5TEA6 688 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 HHATQ5VTY9 493 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms