RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SLC16A4O15374 487 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 TOM1L1O75674 476 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 F11P03951 625 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 OR52Z1P0C646 297 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 HMGA1P17096 107 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 CYP3A5P20815 502 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 MAPK8P45983 427 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 FOSBP53539 338 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 NLRP12P59046 1061 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 LILRA4P59901 499 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 MAPK7Q13164 816 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 SEMA3BQ13214 749 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 TXNDC8Q6A555 127 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 CC2D1AQ6P1N0 951 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 MDGA1Q8NFP4 955 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 CD101Q93033 1021 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 SENP8Q96LD8 212 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 CNOT6LQ96LI5 555 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 PLEKHA5Q9HAU0 1116 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 TMEM74BQ9NUR3 256 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 UBQLN1Q9UMX0 589 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 CFAP46Q8IYW2 2715 aa13.89□□□□□ -0.19
RABGGTA-213ENST00000560127 UPK3BL1B0FP48 263 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 UPK3BL2E5RIL1 263 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 ODC1P11926 461 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 ENGP17813 658 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 TNFSF9P41273 254 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 FAM193AP78312 1265 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 MCL1Q07820 350 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 ZNF268Q14587 947 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 MTF1Q14872 753 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 TAF12Q16514 161 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 CHCHD4Q8N4Q1 142 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 CPA6Q8N4T0 437 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 USP33Q8TEY7 942 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 EXOC4Q96A65 974 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-213ENST00000560127 LACTBL1A8MY62 500 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 ZIC2O95409 532 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 CLTAP09496 248 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 HAPLN1P10915 354 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 HNRNPLP14866 589 aaKnown RBP eCLIP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 PTGER3P43115 390 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 ZNF174Q15697 407 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 LRRTM3Q86VH5 581 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 MON1AQ86VX9 555 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 OLIG1Q8TAK6 271 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 OSCP1Q8WVF1 389 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 RLN3Q8WXF3 142 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 RUSC1Q9BVN2 902 aa13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 NUSAP1Q9BXS6 441 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 DUS2Q9NX74 493 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-213ENST00000560127 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 SFI1A8K8P3 1242 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 E9PMD0 336 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 H0Y626 953 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 K7EQS6 105 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 CLDN3O15551 220 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 EPB41L2O43491 1005 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 TRIM16O95361 564 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 CYP11A1P05108 521 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 SEC13P55735 322 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 PPP2R3AQ06190 1150 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 SCAPQ12770 1279 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 STRN3Q13033 797 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 ZNF77Q15935 545 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 COL28A1Q2UY09 1125 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 EML3Q32P44 896 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 C2orf27AQ580R0 203 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 RINT1Q6NUQ1 792 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 SLC23A3Q6PIS1 610 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 ZPBP2Q6X784 338 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 C1orf186Q6ZWK4 172 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 ARMCX6Q7L4S7 300 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 RAB44Q7Z6P3 723 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 SYT12Q8IV01 421 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 TMEFF1Q8IYR6 380 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 FRMD1Q8N878 549 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 NECAB1Q8N987 351 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 TMEM161BQ8NDZ6 487 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 STKLD1Q8NE28 680 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 BBC3Q96PG8 261 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 C17orf75Q9HAS0 396 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 MBD1Q9UIS9 605 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 MMP17Q9ULZ9 603 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 WNT6Q9Y6F9 365 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms