RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 LRRC3Q9BY71 257 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 HEBP1Q9NRV9 189 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 DLL3Q9NYJ7 618 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 GDE1Q9NZC3 331 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 CEP72Q9P209 647 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 TUBGCP4Q9UGJ1 667 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 FBXL5Q9UKA1 691 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
USP3-215ENST00000559771 INSL5Q9Y5Q6 135 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 MYH11P35749 1972 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 GPR179Q6PRD1 2367 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 KIF26AQ9ULI4 1882 aaPredicted RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 ZFHX4Q86UP3 3567 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 NPHP3-ACAD11A0A0J9YXS1 232 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 DCDC2BA2VCK2 349 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 KIAA1324LA8MWY0 1029 aaPredicted RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 SYN3O14994 580 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 ATXN7O15265 892 aaPredicted RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 TRAPPC3O43617 180 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 MICAL2O94851 1124 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 GJA1P17302 382 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 PTPN2P17706 415 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 RFX1P22670 979 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 GUCY2CP25092 1073 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 HOXC13P31276 330 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 RPL9P32969 192 aaKnown RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 PRPHP41219 470 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 VIPR2P41587 438 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 RPS9P46781 194 aaKnown RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 AARSP49588 968 aaKnown RBP eCLIP6.33□□□□□ -1.4
USP3-215ENST00000559771 EPHA5P54756 1037 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 SLC12A3P55017 1021 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 SPAG1Q07617 926 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 GRM2Q14416 872 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 BECN1Q14457 450 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 UBXN2BQ14CS0 331 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 SAFBQ15424 915 aaKnown RBP eCLIP6.33□□□□□ -1.4
USP3-215ENST00000559771 ZNF568Q3ZCX4 644 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 ARSHQ5FYA8 562 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 ZBTB41Q5SVQ8 909 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 HYIQ5T013 277 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 OGFOD2Q6N063 350 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 FIGNL1Q6PIW4 674 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 VITQ6UXI7 678 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 TPRG1Q6ZUI0 275 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 CYP2U1Q7Z449 544 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 KCNG4Q8TDN1 519 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 RUBCNQ92622 972 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 ELSPBP1Q96BH3 223 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 SHDQ96IW2 340 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 SUSD3Q96L08 255 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 TBC1D32Q96NH3 1257 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 ASB16Q96NS5 453 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 ACAP3Q96P50 834 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 LRRC3BQ96PB8 259 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 CORO1BQ9BR76 489 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 MKNK1Q9BUB5 465 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 CCDC94Q9BW85 323 aaPredicted RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 DNAJC25Q9H1X3 360 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 PRMT8Q9NR22 394 aaPredicted RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 SPATA6Q9NWH7 488 aaPredicted RBP6.33□□□□□ -1.4
USP3-215ENST00000559771 FBXO4Q9UKT5 387 aa6.33□□□□□ -1.4
USP3-215ENST00000559771 TTC26A0AVF1 554 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 M0QZQ0 153 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 PPEF2O14830 753 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TOM1L1O75674 476 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 OAZ2O95190 189 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 ADRB2P07550 413 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 OR4Q2P0C623 313 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 CXCL8P10145 99 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 PLS3P13797 630 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 LRPAP1P30533 357 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TNFSF9P41273 254 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 GUCY2FP51841 1108 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 YARSP54577 528 aaKnown RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 ARPP19P56211 112 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 HMGN5P82970 282 aaKnown RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 PFKPQ01813 784 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 CSTF1Q05048 431 aaKnown RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 MCL1Q07820 350 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 ADCY1Q08828 1119 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 RAD51AP2Q09MP3 1159 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TWF1Q12792 350 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 MTAPQ13126 283 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 DMP1Q13316 513 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 CTXN3Q4LDR2 81 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TMEM119Q4V9L6 283 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 STXBP5Q5T5C0 1151 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TPGS2Q68CL5 300 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 SLC39A4Q6P5W5 647 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TMC8Q8IU68 726 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 SYT2Q8N9I0 419 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 SHKBP1Q8TBC3 707 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 DNASE1L2Q92874 299 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 KCNN1Q92952 543 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms