RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 RESTQ13127 1097 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 ALCAMQ13740 583 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 SIM2Q14190 667 aaPredicted RBP16.41■□□□□ 0.22
IRF9-204ENST00000559229 LPAL2Q16609 132 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 PRR23BQ6ZRT6 265 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 TMEM86AQ8N2M4 240 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 LRRC52Q8N7C0 313 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 MAB21L3Q8N8X9 362 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 ZSWIM2Q8NEG5 633 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 CXorf38Q8TB03 319 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 LEO1Q8WVC0 666 aaPredicted RBP16.41■□□□□ 0.22
IRF9-204ENST00000559229 SAAL1Q96ER3 474 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 PI4K2AQ9BTU6 479 aa16.41■□□□□ 0.22
IRF9-204ENST00000559229 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
IRF9-204ENST00000559229 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
IRF9-204ENST00000559229 CDV3Q9UKY7 258 aaKnown RBP16.41■□□□□ 0.22
IRF9-204ENST00000559229 EXTL3O43909 919 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
IRF9-204ENST00000559229 IDEP14735 1019 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 SYT1P21579 422 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 CASP5P51878 434 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
IRF9-204ENST00000559229 SPEM2Q0P670 501 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 RUNX3Q13761 415 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 CSGALNACT2Q8N6G5 542 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 SPATA18Q8TC71 538 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 USP13Q92995 863 aaPredicted RBP16.4■□□□□ 0.22
IRF9-204ENST00000559229 CNTNAP3BQ96NU0 1288 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 RTKNQ9BST9 563 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 CNTNAP3Q9BZ76 1288 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 KIF9Q9HAQ2 790 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 ABCB6Q9NP58 842 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 C2orf42Q9NWW7 574 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 GDAP2Q9NXN4 497 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
IRF9-204ENST00000559229 ITGA11Q9UKX5 1188 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 L1RE1Q9UN81 338 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
IRF9-204ENST00000559229 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
IRF9-204ENST00000559229 GPR15P49685 360 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 RPL10AP62906 217 aaKnown RBP16.39■□□□□ 0.21
IRF9-204ENST00000559229 RBP5P82980 135 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 MYL7Q01449 175 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 BFSP1Q12934 665 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 SLC39A14Q15043 492 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 INTS6LQ5JSJ4 861 aaKnown RBP16.39■□□□□ 0.21
IRF9-204ENST00000559229 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 HEATR6Q6AI08 1181 aaKnown RBP16.39■□□□□ 0.21
IRF9-204ENST00000559229 MON1AQ86VX9 555 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
IRF9-204ENST00000559229 MYRFLQ96LU7 910 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 PANK2Q9BZ23 570 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 TMEM206Q9H813 350 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 HPS4Q9NQG7 708 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 PANK4Q9NVE7 773 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.21
IRF9-204ENST00000559229 TSC2P49815 1807 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 SPTBN2O15020 2390 aa16.39■□□□□ 0.21
IRF9-204ENST00000559229 ZFHX4Q86UP3 3567 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 ANK1P16157 1881 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 OTOL1A6NHN0 477 aaPredicted RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 TRDMT1O14717 391 aaKnown RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 GABRDO14764 452 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 KIAA0391O15091 583 aaKnown RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 CYP2F1P24903 491 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 STAT6P42226 847 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 LHX1P48742 406 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 AMPD2Q01433 879 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 GRSF1Q12849 480 aaKnown RBP eCLIP16.38■□□□□ 0.21
IRF9-204ENST00000559229 SRSF5Q13243 272 aaKnown RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 ZNF268Q14587 947 aaPredicted RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 DDR2Q16832 855 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 TMEM196Q5HYL7 178 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 SCARA3Q6AZY7 606 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 WDR5BQ86VZ2 330 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 TOP6BLQ8N6T0 577 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 TRMT2BQ96GJ1 504 aaKnown RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 PKMYT1Q99640 499 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 FGFBP2Q9BYJ0 223 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 EBF3Q9H4W6 596 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 PCIF1Q9H4Z3 704 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 PDE11AQ9HCR9 933 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 SIX4Q9UIU6 781 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 GTF3C4Q9UKN8 822 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
IRF9-204ENST00000559229 SNX9Q9Y5X1 595 aa16.38■□□□□ 0.21
IRF9-204ENST00000559229 A0A087X0B3 334 aa16.37■□□□□ 0.21
IRF9-204ENST00000559229 ATG13O75143 517 aa16.37■□□□□ 0.21
IRF9-204ENST00000559229 NOL4O94818 638 aa16.37■□□□□ 0.21
IRF9-204ENST00000559229 PRPF6O94906 941 aaKnown RBP16.37■□□□□ 0.21
IRF9-204ENST00000559229 KRT19P08727 400 aa16.37■□□□□ 0.21
IRF9-204ENST00000559229 ACAT1P24752 427 aaKnown RBP16.37■□□□□ 0.21
IRF9-204ENST00000559229 PCSK1P29120 753 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms