RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FAM163BP0C2L3 166 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 ATP1A3P13637 1013 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 PTMSP20962 102 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 ACO1P21399 889 aaKnown RBP12.22□□□□□ -0.45
SNX1-204ENST00000559061 LHX1P48742 406 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 NDST1P52848 882 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 MRPS5P82675 430 aaKnown RBP12.22□□□□□ -0.45
SNX1-204ENST00000559061 MYL5Q02045 173 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 KCNMA1Q12791 1236 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 KRT31Q15323 416 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 MAN2A1Q16706 1144 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 SLC5A9Q2M3M2 681 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 PHLDB3Q6NSJ2 640 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 GJB7Q6PEY0 223 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 MYLPFQ96A32 169 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 PCED1BQ96HM7 432 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 B3GNT5Q9BYG0 378 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 INTS2Q9H0H0 1204 aaKnown RBP12.22□□□□□ -0.45
SNX1-204ENST00000559061 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 TAB2Q9NYJ8 693 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 DNMT3BQ9UBC3 853 aaKnown RBP12.22□□□□□ -0.45
SNX1-204ENST00000559061 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 ZNF638Q14966 1978 aaKnown RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 A0A0C4DFX4 3053 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 CLDN5O00501 218 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 MOSPD3O75425 235 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 FGFR1OPO95684 399 aaKnown RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 HAPLN1P10915 354 aaPredicted RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 SLC9A1P19634 815 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 CYP2F1P24903 491 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 CCR2P41597 374 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 ZP2Q05996 745 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 ITIH3Q06033 890 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 TWF1Q12792 350 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 LRMPQ12912 555 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 CUL2Q13617 745 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 CBX2Q14781 532 aaPredicted RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 VWA3BQ502W6 1294 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 MDH1BQ5I0G3 518 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 SDHAF4Q5VUM1 108 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 TMC8Q8IU68 726 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 THEM5Q8N1Q8 247 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 EHBP1Q8NDI1 1231 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 OR6B3Q8NGW1 331 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 ZSWIM1Q9BR11 485 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 TUBGCP2Q9BSJ2 902 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 ZNF518BQ9C0D4 1074 aa12.21□□□□□ -0.45
SNX1-204ENST00000559061 ZNF334Q9HCZ1 680 aaPredicted RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 ABI2Q9NYB9 513 aaPredicted RBP12.21□□□□□ -0.45
SNX1-204ENST00000559061 ANAPC1Q9H1A4 1944 aa12.21□□□□□ -0.46
SNX1-204ENST00000559061 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 A8MXQ7 604 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 RNF225M0QZC1 329 aaPredicted RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 CALCAP01258 141 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 HNRNPA1P09651 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNX1-204ENST00000559061 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 PTPN1P18031 435 aaKnown RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 CD58P19256 250 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 EEF1GP26641 437 aaKnown RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 PON1P27169 355 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 PCSK1P29120 753 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 KLK7P49862 253 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 RAD23BP54727 409 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 UVSSAQ2YD98 709 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 PRSS36Q5K4E3 855 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 LIN9Q5TKA1 542 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 ACOT1Q86TX2 421 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 FUKQ8N0W3 1084 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 CRYBG2Q8N1P7 616 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 C12orf29Q8N999 325 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 ZMIZ2Q8NF64 920 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 MYCBPAPQ8TBZ2 947 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 GPR152Q8TDT2 470 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 SMG7Q92540 1137 aaKnown RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 SNX25Q9H3E2 840 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 NDST4Q9H3R1 872 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 CYP3A43Q9HB55 503 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 WDR6Q9NNW5 1121 aaKnown RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 CISHQ9NSE2 258 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 GCNT4Q9P109 453 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 HSFX1Q9UBD0 423 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
SNX1-204ENST00000559061 MAFFQ9ULX9 164 aa12.2□□□□□ -0.46
SNX1-204ENST00000559061 CLUHO75153 1309 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 GTPBP10A4D1E9 387 aaKnown RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 LOC730098B7Z3J9 87 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 PRRG1O14668 218 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 EPHB6O15197 1021 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 BEST1O76090 585 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms