RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SGK1O00141 431 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 PPEF2O14830 753 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 CBFA2T3O75081 653 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 KCNE1P15382 129 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 CDC25CP30307 473 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 AVPR1AP37288 418 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 OPRD1P41143 372 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
SMAD3-206ENST00000558739 SPAG1Q07617 926 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 CAMK2BQ13554 666 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 MTF1Q14872 753 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 DUOXA1Q1HG43 343 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 GAB4Q2WGN9 574 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 EML3Q32P44 896 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 ZNF568Q3ZCX4 644 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 SCUBE3Q8IX30 993 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 DEPTORQ8TB45 409 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 SLC22A12Q96S37 553 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 PRORYQ9H606 182 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 GJB4Q9NTQ9 266 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 TDP1Q9NUW8 608 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 ASB3Q9Y575 518 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 ABLIM1O14639 778 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 TADA3O75528 432 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 FGF19O95750 216 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 HARSP12081 509 aaKnown RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 HSPA4P34932 840 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 AMPD2Q01433 879 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 RPL6Q02878 288 aaKnown RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 NBR1Q14596 966 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 PDGFRLQ15198 375 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 TMPRSS7Q7RTY8 843 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 ITIH5Q86UX2 942 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 CCDC94Q9BW85 323 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 PTPRHQ9HD43 1115 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 DUS2Q9NX74 493 aaKnown RBP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMAD3-206ENST00000558739 ANAPC1Q9H1A4 1944 aa12.93□□□□□ -0.34
SMAD3-206ENST00000558739 USP9YO00507 2555 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 WNT7AO00755 349 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 ADAM23O75077 832 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 ATXN1LP0C7T5 689 aaKnown RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 GCFC2P16383 781 aaKnown RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 HMGA1P17096 107 aaKnown RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 HOXD12P35452 270 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 NAMPTP43490 491 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 GPR15P49685 360 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 NLRP12P59046 1061 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 HNRNPDQ14103 355 aaKnown RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 ZNF77Q15935 545 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 IL17RCQ8NAC3 791 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 TXNDC5Q8NBS9 432 aaKnown RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 ERLEC1Q96DZ1 483 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 LINC00597Q9H2U6 94 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 IL21RQ9HBE5 538 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 CD93Q9NPY3 652 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 PCOLCE2Q9UKZ9 415 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
SMAD3-206ENST00000558739 TNFSF13BQ9Y275 285 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 ABCA12Q86UK0 2595 aa12.92□□□□□ -0.34
SMAD3-206ENST00000558739 SCN1AP35498 2009 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 TCRBV21S2A2A0A5A6 115 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 OR6C75A6NL08 312 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 F11P03951 625 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMAD3-206ENST00000558739 GRIK2Q13002 908 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 USP4Q13107 963 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 MGAT5BQ3V5L5 792 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 SLC39A12Q504Y0 691 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 ZC2HC1CQ53FD0 456 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-206ENST00000558739 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 RNF20Q5VTR2 975 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 OVOS1Q6IE37 1185 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 TAS1R3Q7RTX0 852 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 CEP76Q8TAP6 659 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 OSCP1Q8WVF1 389 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 FCRL3Q96P31 734 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-206ENST00000558739 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
SMAD3-206ENST00000558739 ACO2Q99798 780 aaKnown RBP12.91□□□□□ -0.34
SMAD3-206ENST00000558739 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms