RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 ATICP31939 592 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 GJC1P36383 396 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 TNFSF9P41273 254 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 PHKA2P46019 1235 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 MYL6P60660 151 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 LACTBP83111 547 aaPredicted RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 TFAMQ00059 246 aaKnown RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 FSTL1Q12841 308 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 IFT88Q13099 833 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 PPIL2Q13356 520 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 PRKG1Q13976 671 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 TTLL4Q14679 1199 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 MORF4L2Q15014 288 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 HADHQ16836 314 aaKnown RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 FAM187BQ17R55 369 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 TFDP3Q5H9I0 405 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 ZNF484Q5JVG2 852 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 HIBCHQ6NVY1 386 aaPredicted RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 SPOCD1Q6ZMY3 1216 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 FASTKD5Q7L8L6 764 aaKnown RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 PCGF5Q86SE9 256 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 ERICH1Q86X53 443 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 CNPY4Q8N129 248 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 SHCBP1Q8NEM2 672 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 DYDC1Q8WWB3 177 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 ATXN2LQ8WWM7 1075 aaKnown RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 SPATA33Q96N06 139 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 MCEEQ96PE7 176 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 ASCC2Q9H1I8 757 aaPredicted RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 FZD8Q9H461 694 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 RPF1Q9H9Y2 349 aaKnown RBP7.67□□□□□ -1.18
VPS13C-206ENST00000558338 AAASQ9NRG9 546 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 TNFSF13BQ9Y275 285 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 DNAJC25-GNG10A0A024R161 153 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 TCRBV5S1A1TA0A578 114 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 SMAPO00193 183 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 DNALI1O14645 258 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CNMDO75829 334 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ITGAVP06756 1048 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 KLRC2P26717 231 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 MARK3P27448 753 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CHKAP35790 457 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ASPAP45381 313 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ACTN3Q08043 901 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ACAP1Q15027 740 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 LY6KQ17RY6 165 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ZNF667Q5HYK9 610 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 PHLDB2Q86SQ0 1253 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 RHPN2Q8IUC4 686 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ALLCQ8N6M5 410 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ARHGEF2Q92974 986 aaKnown RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 NKD2Q969F2 451 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 FAM84AQ96KN4 292 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ZNF317Q96PQ6 595 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 HEMGNQ9BXL5 484 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 BCO2Q9BYV7 579 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ADAM7Q9H2U9 754 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CYP3A43Q9HB55 503 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 PCDH9Q9HC56 1237 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 PTPRHQ9HD43 1115 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ERAP1Q9NZ08 941 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 NINJ2Q9NZG7 142 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 KCNH4Q9UQ05 1017 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 SHOC2Q9UQ13 582 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 R3HDM2Q9Y2K5 976 aaKnown RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CAPN7Q9Y6W3 813 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ANK1P16157 1881 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 COL1A2P08123 1366 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 hCG_1818297A0A087WSY0 165 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ANKRD65E5RJM6 399 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 INO80B-WBP1J3KQ70 363 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 TP73O15350 636 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 MAGEB2O15479 319 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CST3P01034 146 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 GSTA1P08263 222 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CFHP08603 1231 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 WEE2P0C1S8 567 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 MCF2P10911 925 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ATF7P17544 494 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 SLCO1A2P46721 670 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 VCPP55072 806 aaKnown RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 IFI35P80217 286 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 CNGA2Q16280 664 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 TSNAXIP1Q2TAA8 658 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 P3H1Q32P28 736 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 SEZ6Q53EL9 994 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 LACTB2Q53H82 288 aaPredicted RBP7.66□□□□□ -1.18
VPS13C-206ENST00000558338 C2CD6Q53TS8 623 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 LLGL2Q6P1M3 1020 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 PPP1R21Q6ZMI0 780 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 ARHGEF18Q6ZSZ5 1173 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 EXOC3L1Q86VI1 746 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 NT5DC4Q86YG4 428 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 THNSL1Q8IYQ7 743 aa7.66□□□□□ -1.18
VPS13C-206ENST00000558338 LRRC71Q8N4P6 559 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms