RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NFE2Q16621 373 aaPredicted RBP12.79□□□□□ -0.36
HERC1-202ENST00000558324 DDR2Q16832 855 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 KNOP1Q1ED39 458 aaKnown RBP12.79□□□□□ -0.36
HERC1-202ENST00000558324 BMT2Q1RMZ1 405 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 ZNF852Q6ZMS4 543 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 ASCL5Q7RTU5 278 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 SMG9Q9H0W8 520 aaKnown RBP12.79□□□□□ -0.36
HERC1-202ENST00000558324 TRPV4Q9HBA0 871 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 IL21Q9HBE4 155 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 SPATA6Q9NWH7 488 aaPredicted RBP12.79□□□□□ -0.36
HERC1-202ENST00000558324 PIAS3Q9Y6X2 628 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 ATP2C2O75185 946 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 LMO2P25791 158 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 PCSK1P29120 753 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 CDC25CP30307 473 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 SYKP43405 635 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 LHX1P48742 406 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 CASP4P49662 377 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 NDUFA8P51970 172 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 STK4Q13043 487 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 SPATA2LQ8IUW3 424 aaPredicted RBP12.78□□□□□ -0.36
HERC1-202ENST00000558324 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 MFSD6LQ8IWD5 586 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 KIAA0895Q8NCT3 520 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
HERC1-202ENST00000558324 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 SYT15Q9BQS2 421 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 TASP1Q9H6P5 420 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
HERC1-202ENST00000558324 R4GN57 208 aa12.78□□□□□ -0.36
HERC1-202ENST00000558324 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 PRR23AA6NEV1 266 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 SLC38A8A6NNN8 435 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 PROB1E7EW31 1015 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 GABRDO14764 452 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 CST3P01034 146 aaPredicted RBP12.77□□□□□ -0.37
HERC1-202ENST00000558324 PDGFRBP09619 1106 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
HERC1-202ENST00000558324 SOX9P48436 509 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 NLRP12P59046 1061 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 SNRPFP62306 86 aaKnown RBP12.77□□□□□ -0.37
HERC1-202ENST00000558324 TNNC1P63316 161 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 SCN4BQ8IWT1 228 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 FSIP1Q8NA03 581 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 CSGALNACT1Q8TDX6 532 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 MYLPFQ96A32 169 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 E2F7Q96AV8 911 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 LRRC3BQ96PB8 259 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 SLC46A2Q9BY10 475 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 CGNQ9P2M7 1197 aaKnown RBP12.77□□□□□ -0.37
HERC1-202ENST00000558324 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 HPSEQ9Y251 543 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.37
HERC1-202ENST00000558324 COL4A2P08572 1712 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 TICRRQ7Z2Z1 1910 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 ARNTLO00327 626 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 NCAM2O15394 837 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 LAMTOR5O43504 91 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 PHACTR2O75167 634 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 RPN1P04843 607 aaKnown RBP12.76□□□□□ -0.37
HERC1-202ENST00000558324 SP9P0CG40 484 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 CCNE1P24864 410 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
HERC1-202ENST00000558324 MYL6P60660 151 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 RPL10AP62906 217 aaKnown RBP12.76□□□□□ -0.37
HERC1-202ENST00000558324 CYP27A1Q02318 531 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 FCHO2Q0JRZ9 810 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 BIRC3Q13489 604 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 TRPC3Q13507 836 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 TXNDC8Q6A555 127 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 DPH6Q7L8W6 267 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 MAB21L3Q8N8X9 362 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 TTC16Q8NEE8 873 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 SPATA18Q8TC71 538 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 PLEKHO2Q8TD55 490 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 FAM3CQ92520 227 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 NELL2Q99435 816 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
HERC1-202ENST00000558324 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
HERC1-202ENST00000558324 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 ABCB6Q9NP58 842 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 CRTAC1Q9NQ79 661 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms